Direkt zum Inhalt
Merck

Hydrogen-deuterium exchange in imidazole as a tool for studying histidine phosphorylation.

Analytical and bioanalytical chemistry (2014-10-31)
Małgorzata Cebo, Martyna Kielmas, Justyna Adamczyk, Marek Cebrat, Zbigniew Szewczuk, Piotr Stefanowicz
ZUSAMMENFASSUNG

Isotope exchange at the histidine C2 atom of imidazole in D2O solution is well known to occur at a significantly slower rate than the exchange of amide protons. Analysis of the kinetics of this isotope-exchange reaction is proposed herein as a method of detecting histidine phosphorylation. This modification of His-containing peptides is challenging to pinpoint because of its instability under acidic conditions as well as during CID-MS analysis. In this work, we investigated the effect of phosphorylation of the histidine side chain in peptides on deuterium-hydrogen exchange (DHX) in the imidazole. The results demonstrate that phosphorylation dramatically slows the rate of the DHX reaction. This phenomenon can be applied to detect phosphorylation of peptides at the histidine residue (e.g., in enzymatic digests). We also found that the influence of the peptide sequence on the exchange kinetics is relatively small. A CID fragmentation experiment revealed that there was no detectable hydrogen scrambling in peptides deuterated at C2 of the imidazole ring. Therefore, MS/MS can be used to directly identify the locations of deuterium ions incorporated into peptides containing multiple histidine moieties.

MATERIALIEN
Produktnummer
Marke
Produktbeschreibung

Sigma-Aldrich
Acetonitril, suitable for HPLC, gradient grade, ≥99.9%
Sigma-Aldrich
Methanol, suitable for HPLC, ≥99.9%
Sigma-Aldrich
Wasser, suitable for HPLC
Sigma-Aldrich
Deuteriumoxid, 99.9 atom % D
Sigma-Aldrich
Dichlormethan, suitable for HPLC, ≥99.8%, contains amylene as stabilizer
Sigma-Aldrich
Methanol, ACS reagent, ≥99.8%
Sigma-Aldrich
Acetonitril, HPLC Plus, ≥99.9%
Sigma-Aldrich
Dichlormethan, contains 40-150 ppm amylene as stabilizer, ACS reagent, ≥99.5%
Sigma-Aldrich
Wasser, Nuclease-Free Water, for Molecular Biology
Sigma-Aldrich
N,N-Dimethylformamid, ACS reagent, ≥99.8%
Sigma-Aldrich
N,N-Dimethylformamid, suitable for HPLC, ≥99.9%
Sigma-Aldrich
Ameisensäure, reagent grade, ≥95%
Sigma-Aldrich
Methanol, HPLC Plus, ≥99.9%
Sigma-Aldrich
Dichlormethan, HPLC Plus, for HPLC, GC, and residue analysis, ≥99.9%, contains 50-150 ppm amylene as stabilizer
Sigma-Aldrich
Wasser, sterile-filtered, BioReagent, suitable for cell culture
Sigma-Aldrich
Ameisensäure, ACS reagent, ≥96%
Sigma-Aldrich
Acetonitril, ACS reagent, ≥99.5%
Sigma-Aldrich
Ammoniak -Lösung, 7 N in methanol
Sigma-Aldrich
Wasser, Deionized
Sigma-Aldrich
Acetonitril, suitable for HPLC, gradient grade, ≥99.9%
Sigma-Aldrich
Methanol, suitable for HPLC, gradient grade, suitable as ACS-grade LC reagent, ≥99.9%
Sigma-Aldrich
N,N-Diisopropylethylamin, 99.5%, biotech. grade
Sigma-Aldrich
N,N-Dimethylformamid, anhydrous, 99.8%
Sigma-Aldrich
Dichlormethan, ACS reagent, ≥99.5%, contains 40-150 ppm amylene as stabilizer
Sigma-Aldrich
Deuteriumoxid, 99.9 atom % D, contains 0.05 wt. % 3-(trimethylsilyl)propionic-2,2,3,3-d4 acid, sodium salt
Sigma-Aldrich
Acetonitril, anhydrous, 99.8%
Sigma-Aldrich
Methanol, Laboratory Reagent, ≥99.6%
Sigma-Aldrich
Dichlormethan, anhydrous, ≥99.8%, contains 40-150 ppm amylene as stabilizer
Sigma-Aldrich
Wasser, for embryo transfer, sterile-filtered, BioXtra, suitable for mouse embryo cell culture
Sigma-Aldrich
N,N-Dimethylformamid, ReagentPlus®, ≥99%