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WTA2

Complete Whole Transcriptome Amplification Kit

DNA polymerase included, Complete Kit with optimized enzyme to amplify total RNA in <4 hours, no 3′ bias

Synonim(y):

transcriptome amplification kit

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Informacje o tej pozycji

NACRES:
NA.55
UNSPSC Code:
41121800

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Nazwa produktu

Complete Whole Transcriptome Amplification Kit, DNA polymerase included, Complete Kit with optimized enzyme to amplify total RNA in <4 hours, no 3′ bias

technique(s)

whole genome amplification: suitable

shipped in

wet ice

storage temp.

−20°C

Quality Level

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technique(s)

whole genome amplification: suitable

technique(s)

whole genome amplification: suitable

technique(s)

whole genome amplification: suitable

technique(s)

whole genome amplification: suitable

shipped in

wet ice

shipped in

wet ice

shipped in

wet ice

shipped in

wet ice

storage temp.

−20°C

storage temp.

−20°C

storage temp.

−20°C

storage temp.

−20°C

Quality Level

200

Quality Level

200

Quality Level

200

Quality Level

200

Application

Complete Whole Transcriptome Amplification Kit is used for the following applications:
  • To establish a protocol for the simultaneous analysis of DNA and RNA viruses present in pig feces using process controlled deep sequencing.[1]
  • Reverse transcription and cDNA amplification[2][3][4][5][6][7]
  • For the synthesis and amplification of cDNA library using Genomic RNA released from immunocaptured PPV particles[8]
  • Nucleic Acid Preparation and Deep Sequencing (The extracted nucleic acids were randomly primed for cDNA synthesis)[9]
  • Amplification of RNA andssDNA viruses for Viral metagenomics from low-input clinical samples[10]
Suitable for use with downstream applications including:
  • qPCR
  • microarray analysis
  • cloning

Biochem/physiol Actions

The WTA2 process involves two steps. In the first step, sample RNA is reverse transcribed with non-self-complementary primers composed of a quasi-random 3′ end and a universal 5′ end. During this process, displaced single strands serve as new templates for primer annealing and extension. The resultant cDNA library, comprised of random, overlapping 100 - 1000 base fragments flanked by universal end sequence. The 2nd step amplifies the cDNA library by PCR using WTA2 polymerase and a universal end primer to produce WTA2 product.

Features and Benefits

  • Achieve up to 10,000x amplification in less than 4 hours with less than 30 minutes of "hands on" time required
  • Only 20 pg of total RNA template is required to amplify suitable cDNA for microarray profiling
  • Contains all needed components for cDNA amplification
  • Achieve linear amplification of expressed genes and exons without 3′ or 5′ bias
  • Effectively amplifies single cell or low input RNA, including mRNA and total RNA from any animal, plant, or microorganism

General description

WTA2 is optimized to amplify RNA from formalin-fixed, paraffin-embedded (FFPE) and other damaged or degraded samples. Whole Transcriptome Amplification (WTA) technology, allows for representative amplification of low nanogram quantities of total RNA in less than 4 hours without 3′-bias. Amplification products are suitable for applications such as qPCR, micro array analysis, and cloning. The WTA2 kit contains the polymerase needed to amplify the cDNA library.
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Elementy zestawu są też dostępne oddzielnie

Numer produktu
Opis
Karta charakterystyki

  • Library Synthesis EnzymeKarta charakterystyki

  • Library Synthesis SolutionKarta charakterystyki

  • Amplification MixKarta charakterystyki

  • Library Synthesis BufferKarta charakterystyki

  • W4502Water, Nuclease-Free Water, for Molecular BiologyKarta charakterystyki

  • Amplification EnzymeKarta charakterystyki

  • D7295Deoxynucleotide Mix, 10 mM, Molecular Biology ReagentKarta charakterystyki

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Klasa składowania

10 - Combustible liquids


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Dokumenty związane z niedawno zakupionymi produktami zostały zamieszczone w Bibliotece dokumentów.

Odwiedź Bibliotekę dokumentów

Zahedan rhabdovirus, a novel virus detected in ticks from Iran
Dilcher M, et al
Virology Journal, 12, 183-183 (2015)
Lung virome convergence precedes hospital-acquired pneumonia in intubated critically ill patients
Anani H, et al.
Cell reports. Medicine, 102289-102289 (2025)
Richard J Hall et al.
Journal of virological methods, 195, 194-204 (2013-09-17)
The discovery of new or divergent viruses using metagenomics and high-throughput sequencing has become more commonplace. The preparation of a sample is known to have an effect on the representation of virus sequences within the metagenomic dataset yet comparatively little
Anna Sheveleva et al.
Virus genes, 47(2), 385-388 (2013-07-03)
The near-complete (99.7 %) genome sequence of a novel Russian Plum pox virus (PPV) isolate Pk, belonging to the strain Winona (W), has been determined by 454 pyrosequencing with the exception of the thirty-one 5'-terminal nucleotides. This region was amplified using
Distinct degenerative phenotype of articular cartilage from knees with meniscus tear compared to knees with osteoarthritis
Rai MF, et al.
Osteoarthritis and Cartilage, 27, 945-955 (2019)

Produkty

The efficacy of amplification of small quantities of total RNA with the Complete Whole Transcriptome Amplification Kit (WTA2) was examined in this study.

Transplex Whole Transcriptome Amplification (WTA2) precisely amplifies RNA maintaining transcript levels in test and reference samples.

Protokoły

TransPlex® kits' amplification products integrate seamlessly into existing Agilent workflows for microarray target expression analyses.

WTA2, a Whole Transcriptome Amplification (WTA) method, allows for representative amplification of nanogram quantities of total RNA in less than 4 hours without 3-bias

Powiązane treści

Transplex Whole Transcriptome Amplification FAQs on topics including whole transcriptome steps, RNA source, including archival fixed tissue, library purification, quantitation of the product and downstream applications

Questions

  1. What are the differences between WTA1 and WTA2?

    1 answer
    1. WTA2 is designed to amplify RNA from formalin-fixed, paraffin-embedded (FFPE) and other damaged or degraded samples. Here are the main differences between the two kits:

      1. WTA1 was developed by Rubicon. WTA2 was developed by Sigma-Aldrich.
      2. The library synthesis primers for WTA2 are different and can prime more frequently, which is crucial for degraded RNAs.
      3. The library synthesis conditions are different due to the change in the primers.
      4. There are improved cycling conditions in WTA2 to optimize amplification of both high AT templates and high GC templates.
      5. WTA1 does not contain an amplification enzyme, which needs to be supplied separately. WTA2 includes the amplification enzyme.

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