Pular para o conteúdo
Merck

The chromatin Remodeler CHD8 is required for activation of progesterone receptor-dependent enhancers.

PLoS genetics (2015-04-22)
María Ceballos-Chávez, Alicia Subtil-Rodríguez, Eugenia G Giannopoulou, Daniel Soronellas, Elena Vázquez-Chávez, Guillermo P Vicent, Olivier Elemento, Miguel Beato, José C Reyes
RESUMO

While the importance of gene enhancers in transcriptional regulation is well established, the mechanisms and the protein factors that determine enhancers activity have only recently begun to be unravelled. Recent studies have shown that progesterone receptor (PR) binds regions that display typical features of gene enhancers. Here, we show by ChIP-seq experiments that the chromatin remodeler CHD8 mostly binds promoters under proliferation conditions. However, upon progestin stimulation, CHD8 re-localizes to PR enhancers also enriched in p300 and H3K4me1. Consistently, CHD8 depletion severely impairs progestin-dependent gene regulation. CHD8 binding is PR-dependent but independent of the pioneering factor FOXA1. The SWI/SNF chromatin-remodelling complex is required for PR-dependent gene activation. Interestingly, we show that CHD8 interacts with the SWI/SNF complex and that depletion of BRG1 and BRM, the ATPases of SWI/SNF complex, impairs CHD8 recruitment. We also show that CHD8 is not required for H3K27 acetylation, but contributes to increase accessibility of the enhancer to DNaseI. Furthermore, CHD8 was required for RNAPII recruiting to the enhancers and for transcription of enhancer-derived RNAs (eRNAs). Taken together our data demonstrate that CHD8 is involved in late stages of PR enhancers activation.

MATERIAIS
Número do produto
Marca
Descrição do produto

Sigma-Aldrich
Dodecilsulfato de sódio, BioReagent, suitable for electrophoresis, for molecular biology, ≥98.5% (GC)
Sigma-Aldrich
Dodecilsulfato de sódio, ≥99.0% (GC), dust-free pellets
Sigma-Aldrich
Dodecilsulfato de sódio, BioUltra, for molecular biology, 10% in H2O
Sigma-Aldrich
Álcool etílico, puro, 200 proof, anhydrous, ≥99.5%
Sigma-Aldrich
Dodecilsulfato de sódio, BioUltra, for molecular biology, 20% in H2O
Sigma-Aldrich
Anti-α-tubulina monoclonal, clone DM1A, ascites fluid
Sigma-Aldrich
Dodecilsulfato de sódio, BioUltra, for molecular biology, ≥99.0% (GC)
Sigma-Aldrich
Dodecilsulfato de sódio, ACS reagent, ≥99.0%
Supelco
Dodecilsulfato de sódio, dust-free pellets, suitable for electrophoresis, for molecular biology, ≥99.0% (GC)
Sigma-Aldrich
Álcool etílico, puro, 190 proof, ACS spectrophotometric grade, 95.0%
Sigma-Aldrich
Dodecilsulfato de sódio, ≥98.0% (GC)
Sigma-Aldrich
Dodecilsulfato de sódio, ReagentPlus®, ≥98.5% (GC)
Sigma-Aldrich
Dodecilsulfato de sódio, 92.5-100.5% based on total alkyl sulfate content basis
Sigma-Aldrich
Dodecilsulfato de sódio, tested according to NF, mixture of sodium alkyl sulfates consisting mainly of sodium dodecyl sulfate
Sigma-Aldrich
Dodecilsulfato de sódio, BioXtra, ≥99.0% (GC)
Sigma-Aldrich
Dodecilsulfato de sódio, ≥90% ((Assay))
Sigma-Aldrich
Anti-BAF250a/ARID1a Antibody, clone PSG3, clone PSG3, Upstate®, from mouse
Sigma-Aldrich
Dodecilsulfato de sódio, BioReagent, suitable for electrophoresis, for molecular biology, ≥98.5% (GC), free-flowing, Redi-Dri
Sigma-Aldrich
Álcool etílico, puro, 190 proof, ACS reagent, meets USP testing specifications, Excise Tax-free, Permit for use required
Sigma-Aldrich
Álcool etílico, puro, 160 proof, Excise Tax-free, Permit for use required
Sigma-Aldrich
MISSION® esiRNA, targeting human CHD8