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Merck

ADAR1-Dependent RNA Editing Promotes MET and iPSC Reprogramming by Alleviating ER Stress.

Cell stem cell (2020-05-13)
Diana Guallar, Alejandro Fuentes-Iglesias, Yara Souto, Cristina Ameneiro, Oscar Freire-Agulleiro, Jose Angel Pardavila, Adriana Escudero, Vera Garcia-Outeiral, Tiago Moreira, Carmen Saenz, Heng Xiong, Dongbing Liu, Shidi Xiao, Yong Hou, Kui Wu, Daniel Torrecilla, Jochen C Hartner, Miguel G Blanco, Leo J Lee, Miguel López, Carl R Walkley, Jianlong Wang, Miguel Fidalgo, Diana Guallar, Alejandro Fuentes-Iglesias, Yara Souto, Cristina Ameneiro, Oscar Freire-Agulleiro, Jose Angel Pardavila, Adriana Escudero, Vera Garcia-Outeiral, Tiago Moreira, Carmen Saenz, Heng Xiong, Dongbing Liu, Shidi Xiao, Yong Hou, Kui Wu, Daniel Torrecilla, Jochen C Hartner, Miguel G Blanco, Leo J Lee, Miguel López, Carl R Walkley, Jianlong Wang, Miguel Fidalgo
ZUSAMMENFASSUNG

RNA editing of adenosine to inosine (A to I) is catalyzed by ADAR1 and dramatically alters the cellular transcriptome, although its functional roles in somatic cell reprogramming are largely unexplored. Here, we show that loss of ADAR1-mediated A-to-I editing disrupts mesenchymal-to-epithelial transition (MET) during induced pluripotent stem cell (iPSC) reprogramming and impedes acquisition of induced pluripotency. Using chemical and genetic approaches, we show that absence of ADAR1-dependent RNA editing induces aberrant innate immune responses through the double-stranded RNA (dsRNA) sensor MDA5, unleashing endoplasmic reticulum (ER) stress and hindering epithelial fate acquisition. We found that A-to-I editing impedes MDA5 sensing and sequestration of dsRNAs encoding membrane proteins, which promote ER homeostasis by activating the PERK-dependent unfolded protein response pathway to consequently facilitate MET. This study therefore establishes a critical role for ADAR1 and its A-to-I editing activity during cell fate transitions and delineates a key regulatory layer underlying MET to control efficient reprogramming.

MATERIALIEN
Produktnummer
Marke
Produktbeschreibung

Millipore
Benzonase® Nuklease, ≥250 units/μL, ≥90% (SDS-PAGE), recombinant, expressed in E. coli, buffered aqueous glycerol solution
Sigma-Aldrich
Proteasehemmer-Cocktail, for use with mammalian cell and tissue extracts, DMSO solution
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RPMI-1640-Medium, With sodium bicarbonate, without L-glutamine, liquid, sterile-filtered, suitable for cell culture
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Doxycyclin -hyclat
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2-Mercaptoethanol, ≥99.0%
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(Z)-4-Hydroxytamoxifen, ≥98% Z isomer
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Natriumpyruvat -Lösung, 100 mM, sterile-filtered, BioReagent, suitable for cell culture
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Triton X-100, laboratory grade
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Polyethylenimin, verzweigt, average Mw ~25,000 by LS, average Mn ~10,000 by GPC, branched
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CHIR99021, ≥98% (HPLC)
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Dulbecco Modifiziertes Eagle-Medium/Nährstoffmischung F-12 Schinken, With 15 mM HEPES and sodium bicarbonate, without L-glutamine, liquid, sterile-filtered, suitable for cell culture
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Insulin, recombinant, expressed in yeast (proprietary host)
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Tunicamycin aus Streptomyces sp.
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Thymidin, powder, BioReagent, suitable for cell culture
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(+)-Natrium-L-ascorbat, BioXtra, ≥99.0% (NT)
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Thapsigargin, ≥98% (HPLC), solid film
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GenElute Plasmid Miniprep-Kit, sufficient for 350 purifications
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Staurosporin aus Streptomyces sp., for molecular biology, ≥95% (HPLC)
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Adenosin, suitable for cell culture, BioReagent
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GenElute Gelextraktions-Kit, sufficient for 70 purifications
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Normales Maus-IgG, Normal Mouse IgG Polyclonal Antibody control validated for use in Immunoprecipitation & Western Blotting.
Ficoll®-Paque PREMIUM 1.084, Cytiva 17-5446-02, pack of 6 × 100 mL
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Cytidin, BioReagent, suitable for cell culture, powder, ≥99%
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Guanosin, BioReagent, suitable for cell culture