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Merck

Design, synthesis and biological evaluation of novel pyrenyl derivatives as anticancer agents.

European journal of medicinal chemistry (2014-12-03)
Debasish Bandyopadhyay, Jorge L Sanchez, Adrian M Guerrero, Fang-Mei Chang, Jose C Granados, John D Short, Bimal K Banik
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Polycyclic aromatic hydrocarbons are widespread in nature with a toxicity range from non-toxic to extremely toxic. A series of pyrenyl derivatives has been synthesized following a four-step strategy where the pyrene nucleus is attached with a basic heterocyclic moiety through a carbon linker. Virtual screening of the physicochemical properties and druggability has been carried out. The cytotoxicity of the compounds (1-8) have been evaluated in vitro against a small panel of human cancer cell lines which includes two liver cancer (HepG2 and Hepa 1-6), two colon cancer (HT-29 and Caco-2) and one each for cervical (HeLa) and breast (MCF-7) cancer cell lines. The IC50 data indicate that compound 6 and 8 are the most effective cytotoxic agents in the present set of pyrenyl derivatives, suggesting that having a 4-carbon linker is more effective than a 5-carbon linker and the presence of amide carbonyl groups in the linker severely reduces the efficacy of the compound. The compounds showed selectivity toward cancer cells at lower doses (<5 ฮผM) when compared with the normal hepatocytes. The mechanism of action supports the cell death through apoptosis in a caspase-independent manner without cleavage of poly (ADP-ribose) polymerase (PARP), even though the compounds cause plasma membrane morphological changes. The compounds, whether highly cytotoxic or mildly cytotoxic, localize to the membrane of cells. The compounds with either a piperidine ring (6) or an N-methyl piperazine (8) in the side chain were both capable of circumventing the drug resistance in SKOV3-MDR1-M6/6 ovarian cancer cells overexpressing P-glycoprotein. Qualitative structure-activity relationship has also been studied.

MATERIALS
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Supelco
Pyrene, analytical standard
Sigma-Aldrich
Sodium dodecyl sulfate, ACS reagent, ≥99.0%
Sigma-Aldrich
Pyrene, sublimed grade, 99%
Supelco
Pyrene, certified reference material, TraceCERTยฎ, Manufactured by: Sigma-Aldrich Production GmbH, Switzerland
Sigma-Aldrich
Tetrahydrofuran, anhydrous, contains 250 ppm BHT as inhibitor, ≥99.9%
Sigma-Aldrich
Sodium dodecyl sulfate, ≥98.0% (GC)
Supelco
Diethyl ether, analytical standard
Supelco
Tetrahydrofuran, for ion-selective electrodes, Selectophoreโ„ข, โ‰ฅ99.5%
Sigma-Aldrich
Sodium dodecyl sulfate, ≥90% ((Assay))
Pyrene, BCRยฎ, certified reference material
Supelco
Sodium dodecyl sulfate, suitable for ion pair chromatography, LiChropurโ„ข, โ‰ฅ99.0%
Sigma-Aldrich
Tetrahydrofuran, anhydrous, ≥99.9%, inhibitor-free
Sigma-Aldrich
Diethyl ether, contains 1 ppm BHT as inhibitor, anhydrous, ≥99.7%
Sigma-Aldrich
Bismuth(III) nitrate pentahydrate, reagent grade, 98%
Sigma-Aldrich
Piperidine, ReagentPlusยฎ, 99%
Sigma-Aldrich
Tetrahydrofuran, suitable for HPLC, ≥99.9%, inhibitor-free
Sigma-Aldrich
Diethyl ether
Sigma-Aldrich
Bismuth(III) nitrate pentahydrate, ≥99.99% trace metals basis
Sigma-Aldrich
Bismuth(III) nitrate pentahydrate, 99.999% trace metals basis
Sigma-Aldrich
Sodium dodecyl sulfate, tested according to NF, mixture of sodium alkyl sulfates consisting mainly of sodium dodecyl sulfate
Sigma-Aldrich
Sodium dodecyl sulfate, ReagentPlusยฎ, โ‰ฅ98.5% (GC)
Sigma-Aldrich
Boron-11B, 95 atom % 11B
Supelco
Piperidine, analytical standard
Supelco
Ammonium chloride, Pharmaceutical Secondary Standard; Certified Reference Material
Sigma-Aldrich
Diethyl ether, ACS reagent, ≥98.0%, contains ≤2% ethanol and ≤10ppm BHT as inhibitor
Sigma-Aldrich
Ammonium chloride, puriss., meets analytical specification of Ph. Eur., BP, USP, FCC, 99.5-100.5% (calc. to the dried substance)
Sigma-Aldrich
Tetrahydrofuran, inhibitor-free, suitable for HPLC, ≥99.9%
Supelco
Tetrahydrofuran, Pharmaceutical Secondary Standard; Certified Reference Material
Sigma-Aldrich
Diethyl ether, reagent grade, ≥98%, contains ≤2% ethanol and ≤10ppm BHT as inhibitor
Sigma-Aldrich
Diethyl ether, puriss., contains ~5 mg/L 2,6-di-tert.-butyl-4-methylphenol as stabilizer, meets analytical specification of Ph. Eur., BP, โ‰ฅ99.5% (GC)