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Merck

S9430

Sigma-Aldrich

SYBR® Green I nucleic acid gel stain

greener alternative

10,000 × in DMSO

Sinónimos:

DNA stain, SYBR® green gel dye, safer gel stain

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About This Item

Número de CAS:
MDL number:
UNSPSC Code:
12171500
NACRES:
NA.52
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form

solution

Quality Level

usage

1.0 mL sufficient for 100 mini-gels

greener alternative product characteristics

Designing Safer Chemicals
Learn more about the Principles of Green Chemistry.

sustainability

Greener Alternative Product

concentration

10,000 × in DMSO

technique(s)

PCR: suitable

greener alternative category

storage temp.

−20°C

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General description

SYBR® Green I is a proprietary asymmetrical cyanine dye, which is used to detect nucleic acids. It consists of a N-alkylated benzothiazolium or benzoxazolium ring system, that is joined by a monomethine bridge to a pyridinium or quinolinium ring system.[1] SYBR Green I binds to the minor groove of dsDNA and is excited at a wavelength of 480 nm. It has a peak fluorescence emission of 520 nm.[2]

Application

SYBR® Green I nucleic acid gel stain has been used for:
  • the quantification of dsDNA[3]
  • to stain DNA in polymerase chain reaction (PCR)[4]
  • for comet assay technique[5]
  • to assess spermatozoon membrane integrity[6]
  • for visual inspection of DNA amplified by loop-mediated isothermal amplification (LAMP)[7]
  • as a fluorescent dye in flow cytometry[8]
  • real-time quantitative reverse transcription-polymerase chain reaction (qRT-PCR) for staining reverse-transcribed cDNA[8]

Features and Benefits

  • An ultrasensitive stain for post-electrophoresis staining of dsDNA in agarose or polyacrylamide gels
  • It can also detect ssDNA and RNA in denaturing agarose/formaldehyde and polyacrylamide/urea gels without any pre-washing steps
  • It is less mutagenic than ethidium bromide in Ames tests
  • It provides 50-100 times greater detection sensitivity than ethidium bromide for oligonucleotides
  • Useful for many applications with a limited amount of DNA
  • The binding of SYBR® Green I to DNA does not inhibit the activity of many common restriction endonucleases, including Hind III and EcoR I
  • Removal of this stain in-gel digestion and ligation techniques is not needed
  • SYBR Green I is a greener alternative product to ethidium bromide for staining

Storage and Stability

Store the product at –20 °C. The diluted Staining Solution may be stored, protected from light, either at 2–8 °C for several weeks or at room temperature for 3–4 days.

Legal Information

SYBR is a registered trademark of Life Technologies

Related product

Referencia del producto
Descripción
Precios

Storage Class

10 - Combustible liquids

wgk_germany

WGK 3

flash_point_f

201.2 °F - closed cup

flash_point_c

94 °C - closed cup

ppe

Eyeshields, Gloves, multi-purpose combination respirator cartridge (US)


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Protocolos

SeqPlex DNA Amplification Kit enables NGS from small or degraded DNA quantities for whole genome amplification.

SeqPlex DNA Amplification Kit enables NGS from small or degraded DNA quantities for whole genome amplification.

Hot start dNTP protocol enhances specificity in PCR by blocking DNA polymerase nucleotide incorporation during PCR.

SeqPlex DNA Amplification Kit enables NGS from small or degraded DNA quantities for whole genome amplification.

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Questions

1–4 of 4 Questions  
  1. Does Millipore Sigma offer SAFE Red loading dye?

    1 answer
    1. SAFE Red loading dye is not offered by Millipore Sigma.

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  2. What is the molarity of this product?

    1 answer
    1. This product is a 10,000X concentrated solution suitable to prepare 10L of staining solution for in-gel staining of DNA and RNA. The specific concentration is considered proprietary. Published working concentrations for solutions of Sybr Green I range from 0.5 - 1.0 ug/ml. The molecular weight as published by Chebi, is 509.74 g/mol. Please see the link below to review the product datasheet:
      https://www.sigmaaldrich.com/deepweb/assets/sigmaaldrich/product/documents/282/803/s9430pis-ms.pdf

      Please see the link below to review the Chebi profile:
      https://www.ebi.ac.uk/chebi/searchId.do?chebiId=CHEBI:51461


      chebi file
      https://www.ebi.ac.uk/chebi/searchId.do?chebiId=CHEBI:51461 MW 509.74
      Science direct
      https://www.sciencedirect.com/topics/biochemistry-genetics-and-molecular-biology/sybr-green-i
      'working' concentration 0.5 - 1.0 ug/ml

      Helpful?

  3. Will Product S9430, SYBR® Green I nucleic acid gel stain, stain DNA that contains deaza-G modified nucleotides in place of guanisine?

    1 answer
    1. Product S9430, SYBR® Green I nucleic acid gel stain, will poorly stain DNA containing deaza-G modified nucleotides in place of guanisine.  A way around this issue would be to use a mixture of deaza-G modified nucleotides with guanisine.  This will allow for better staining.

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  4. What is the Department of Transportation shipping information for this product?

    1 answer
    1. Transportation information can be found in Section 14 of the product's (M)SDS.To access the shipping information for this material, use the link on the product detail page for the product.

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