Direkt zum Inhalt
Merck

Prediction model based on decision tree analysis for laccase mediators.

Enzyme and microbial technology (2012-12-04)
Fabiola Medina, Sergio Aguila, Maria Camilla Baratto, Andrea Martorana, Riccardo Basosi, Joel B Alderete, Rafael Vazquez-Duhalt
ZUSAMMENFASSUNG

A Structure Activity Relationship (SAR) study for laccase mediator systems was performed in order to correctly classify different natural phenolic mediators. Decision tree (DT) classification models with a set of five quantum-chemical calculated molecular descriptors were used. These descriptors included redox potential (ɛ°), ionization energy (E(i)), pK(a), enthalpy of formation of radical (Δ(f)H), and OH bond dissociation energy (D(O-H)). The rationale for selecting these descriptors is derived from the laccase-mediator mechanism. To validate the DT predictions, the kinetic constants of different compounds as laccase substrates, their ability for pesticide transformation as laccase-mediators, and radical stability were experimentally determined using Coriolopsis gallica laccase and the pesticide dichlorophen. The prediction capability of the DT model based on three proposed descriptors showed a complete agreement with the obtained experimental results.

MATERIALIEN
Produktnummer
Marke
Produktbeschreibung

Sigma-Aldrich
4′-Hydroxy-3′,5′-dimethoxyacetophenon, 97%
Sigma-Aldrich
Laccase aus Trametes versicolor, powder, light brown, ≥0.5 U/mg
Sigma-Aldrich
Sinapinsäure, ≥98%, powder
Sigma-Aldrich
Vanillinsäure, 97%
Sigma-Aldrich
Syringaldehyd, 98%
Sigma-Aldrich
Laccase aus Agaricus bisporus, powder, deep brown, ≥4 U/mg
Sigma-Aldrich
Laccase aus Rhus vernicifera, crude acetone powder, ≥50 units/mg solid
Sigma-Aldrich
Syringaldazin, indicator for laccase and peroxidase activity
Sigma-Aldrich
2-Ethoxyphenol, 98%
Sigma-Aldrich
3-Methoxycatechin, 99%
Sigma-Aldrich
Syringaldehyd, ≥98%, FG
Sigma-Aldrich
Vanillinsäure, ≥97%, FG
Sigma-Aldrich
Bis(5-chlor-2-hydroxyphenyl)methan, 95%
Sigma-Aldrich
Vanillinsäure, purum, ≥97.0% (HPLC)
Supelco
Sinapinsäure, matrix substance for MALDI-MS, ≥99.0% (T)
Sigma-Aldrich
Syringaldazin, 98%
Supelco
Sinapinsäure, matrix substance for MALDI-MS, ≥99.5%, Ultra pure
Supelco
Vanillinsäure, certified reference material, TraceCERT®, Manufactured by: Sigma-Aldrich Production GmbH, Switzerland