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Abberior® Dyes for Super-Resolution Microscopy Applications

Microscopic methods in life sciences are of tremendous importance for visualization cellular and tissue structures. The development of new microscopy concepts has overcome the resolution barrier given by the diffraction limit, enabling a resolution limit down to about 10 nm. The visualization of cellular structures and molecular interactions can reveal new understanding in biological processes. Due to tremendous efforts in the development of super-resolved fluorescence microscopy, The Nobel Prize in Chemistry for 2014 was awarded to Eric Betzig, Stefan W. Hell, and to William E. Moerner.

These super-resolution microscopy principles are based on several technological approaches. Conventional light microscopy enables a resolution limit of about 250 nm in the x- and y- direction and 450 – 700 nm in the z –direction. Super-resolution techniques have overcome the resolution-limit (point-spread function) at least by a factor of 2. The resolution of super-resolution microscopy depends on the number of points that can be resolved on the structure of interest. Crucial for a successful super-resolution imaging is the choice of fluorescent probe. Brightness and high-contrast ratio between the states are important. In most super-resolution methods, the states of the probe must be controllable, reversible or irreversible, and switchable between a light or a dark state. Depending on the super-resolution method, further photo-physical criteria the probe must be fulfilled. Established techniques include the following:

  • STED (Stimulated emission depletion)
  • GSDIM (Ground State Depletion)
  • PALM (Photoactivated localization microscopy)
  • STORM (Stochastic optical reconstruction microscopy)
  • RESOLFT (reversible saturable optical (flurorescence) transitions)
Three-color STED image of primary hippocampal neurons imaged with the Abberior<sup>&reg;</sup> Instruments Expert Line STED microscope.

Figure 1.Three-color STED image of primary hippocampal neurons imaged with the Abberior® Instruments Expert Line STED microscope. Note: The characteristic ~190 nm beta II spectrin periodicity along distal axons (green), which is only visible in the STED image. Labeled structures and dyes: beta II Spectrin (green, Abberior® STAR580), Bassoon (red, Abberior® STAR635P), Actin cytoskeleton (blue, Phalloidin, Oregon Green 488). Sample was prepared by Elisa D’Este at MPIBPC, Göttingen.

We offer the superior series of Abberior® dyes that are especially designed and tested for super-resolution microscopy such as STED, RESOLFT, PALM, STORM, GSDIM and others. Abberior® STAR, Abberior® CAGE, Abberior® FLIP, Abberior® RSFP – the specific requirements of the super-resolution techniques are served with dedicated dye series. These Dyes are developed and produced by Abberior® GmbH. Stefan Hell is it’s Co-founder.

Benefits

  • Optimized for brightness and low background
  • Optimized switching behavior being the key for super-resolution
  • All markers are tested for different super-resolution methods
    • Abberior® STAR for STED, confocal and epifluorescence imaging
    • Abberior® CAGE & FLIP for PALM, STORM and GSDIM
  • Abberior® dyes are recommended by microscope vendors
  • Proprietary, IP protected products
  • Detailed characteristics of the dyes provided, e.g. optimal STED wavelength

Super-resolution microscopy is dependent on fluorescent labels. Manufactured by Abberior®, the STAR, CAGE and FLIP dyes as well as RSFPs are exceptionally bright and photostable and provide optimized photoswitching for RESOLFT and PALM/STORM imaging. They are the only commercially available dyes that are tailored specifically to the needs of super-resolution microscopy.

Abberior® dyes are also well suited for confocal microscopy, epifluorescence imaging and single molecule applications. Fluorescence applications that depend on a good signal-to-noise ratios and low background cam benefit from Abberior® dyes.

Two subunits of the nuclear pore complex were immunolabeled using antibodies against gp210 and antibodies with multiple specificities (PAN4/5) and secondary antibodies coupled to Abberior® STAR580 and Abberior® STAR635P.

Confocal and STED images. Two subunits of the nuclear pore complex were immunolabeled using antibodies against gp210 and antibodies with multiple specificities (PAN4/5) and secondary antibodies coupled to Abberior® STAR580 and Abberior® STAR635P. Note that gp210 is localized in an eight-fold symmetric structure at the rim of the nuclear pore complex. Imaged with the Abberior® Instruments STEDYCON (compact line).

DyesDescriptionAbsorption Maximum, λabsExtinction Coefficient, εFluorescence Maximum, λflRecommended STEDCat No. NHSCat No. Maleimide
Abberior® CAGE 500for single-molecule switching microscopy (e.g. PALM, STORM, GSDIM)230, 299, 340 nm (non-activated, PBS, pH 7.4)
511 nm (photoactivated, PBS, pH 7.4)
50,000 M-1cm-1
(photoactivated, PBS, pH 7.4)
525 nm (PBS, pH 7.4)595-615 nm4425492546
Abberior® CAGE 532for single-molecule switching microscopy (e.g. PALM, STORM, GSDIM)237, 302, 350 nm (non-activated, PBS, pH 7.4)
533 nm (photoactivated, PBS, pH 7.4)
82,000 M-1cm-1
(photoactivated, PBS, pH 7.4)
541 nm (PBS, pH 7.4)610-640 nm 95705
Abberior® CAGE 552for single-molecule switching microscopy (e.g. PALM, STORM, GSDIM)231, 308, 350 nm (non-activated, PBS, pH 7.4)
552 nm (photoactivated, PBS, pH 7.4)
66,000 M-1cm-1
(photoactivated, PBS, pH 7.4)
574 nm (PBS, pH 7.4)650-670 nm9482292545
Abberior® CAGE 590for single-molecule switching microscopy (e.g. PALM, STORM, GSDIM)262, 325, 351 nm (non-activated, PBS, pH 7.4)
595 nm (photoactivated, PBS, pH 7.4)
75,000 M-1cm-1
(photoactivated, PBS, pH 7.4)
615 nm (PBS, pH 7.4)685-715 nm77958no
Abberior® FLIP 565for single-molecule switching microscopy (e.g. PALM, STORM, GSDIM)314 nm (closed form, PBS, pH 7.4)
566 nm (open form, PBS, pH 7.4)
47,000 M-1cm-1
(open form, PBS pH, 7.4)
580 nm (open form, PBS, pH 7.4)-7918992544
Abberior® STAR 440SXPfor long Stokes STED and 2-color STED application432 nm (PBS, pH 7.4)33,000 M-1cm-1
(PBS, pH 7.4)
511 nm (PBS, pH 7.4)590-620 nm6822138361
Abberior® STAR 470SXPfor long Stokes STED and 2-color STED application467 nm (PBS, pH 7.4)29,000 M-1cm-1
(PBS, pH 7.4)
598 nm (PBS, pH 7.4)740-770 nm94716no
Abberior® STAR 488for STED application503 nm (PBS, pH 7.4)65,000 M-1cm-1
(PBS, pH 7.4)
524 nm (PBS, pH 7.4)585-605 nm61048no
Abberior® STAR 512for STED application511 nm (PBS, pH 7.4)85,000 M-1cm-1
(PBS, pH 7.4)
530 nm (PBS, pH 7.4)590-620 nm3892203004
Abberior® STAR 580for STED application587 nm (PBS, pH 7.4)85,000 M-1cm-1
(PBS, pH 7.4)
607 nm (PBS, pH 7.4)690-720 nm38377no
Abberior® STAR 635for STED application635 nm (PBS, pH 7.4)110,000 M-1cm-1
(PBS, pH 7.4)
655 nm (PBS, pH 7.4)740-770 nm3055896013
Abberior® STAR 635Pfor STED application638 nm (PBS, pH 7.4)120,000 M-1cm-1
(PBS, pH 7.4)
651 nm (PBS, pH 7.4)740-770 nm07679no

For North America, we also provide a series of antibody labeled Abberior® conjugates.

Cat No.DescriptionAvailabilityPack size
30483Anti-Mouse IgG-Abberior® CAGE 635 antibody produced in goatUS only500 µg
54287Anti-Rabbit IgG-Abberior® CAGE 590 antibody produced in goatUS only500 µg
41155Anti-Rabbit IgG-Abberior® CAGE 500 antibody produced in goatUS only500 µg
52283Anti-Mouse IgG-Abberior® STAR  RED antibody produced in goatUS only500 µg
53399Anti-Rabbit IgG-Abberior® STAR 635P antibody produced in goatUS only500 µg
41699Anti-Rabbit IgG-Abberior® STAR RED antibody produced in goatUS only500 µg
41348Anti-Rabbit IgG-Abberior® STAR 635 antibody produced in goatUS only
500 µg
53654Anti-Rabbit IgG-Abberior® STAR 600 antibody produced in goatUS only500 µg
41367Anti-Rabbit IgG-Abberior® STAR 580 antibody produced in goatUS only500 µg
52403Anti-Mouse IgG-Abberior® STAR 580 antibody produced in goatUS only500 µg
00289Anti-Rabbit IgG-Abberior® STAR 512 antibody produced in goatUS only500 µg
52944Anti-Rabbit IgG-Abberior® STAR 488 antibody produced in goatUS only500 µg
53366Anti-Mouse IgG-Abberior® STAR 488 antibody produced in goatUS only500 µg

References

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H. Schill, et al. 4-Trifluoromethyl-Substituted Coumarins with Large Stokes Shifts: Synthesis, Bioconjugates, and Their Use in Super-Resolution Fluorescence Microscopy. Chem. Eur. J., 19(49), pp. 16556–16565, DOI: 10.1002/chem.201302037 (2013).
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Y. Wang, et al. Time-Gated Stimulated Emission Depletion Nanoscopy. Opt. Eng., 52(9), 093107, DOI: 10.1117/1.OE.52.9.093107 (2013).
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M. V. Sednev, et al. Carborhodol: A New Hybrid Fluorophore Obtained by Combination of Fluorescein and Carbopyronine Dye Cores. Bioconjugate Chem., 24(4), pp 690–700, DOI: 10.1021/bc3006732 (2013).
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