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Documentos clave

D1501

Sigma-Aldrich

Deoxyribonucleic acid sodium salt from calf thymus

Type I, fibers

Sinónimos:

ctDNA, DNA sodium salt from calf thymus, Thymonucleic acid sodium salt

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About This Item

Número de CAS:
MDL number:
UNSPSC Code:
41106305
eCl@ss:
32160414
NACRES:
NA.51
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type

Type I

Quality Level

form

fibers

color

white

storage temp.

2-8°C

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Application

Calf thymus DNA (CT-DNA) is a natural DNA widely used in studies of DNA binding anticancer agents and DNA binding agents that modulate DNA structure and function. Calf thymus DNA is also used in physicochemical studies of DNA behavior in solution.

Quality

"Highly Polymerized"

Physical properties

λmax 259 nm (100 mM phosphate buffer, pH 7.0).
DNA from calf thymus is 41.9 mole % G-C and 58.1 mole % A-T.1 An OD of 1.0 at 260 nm corresponds to ~ 50 μg of double-stranded DNA.

Physical form

fibrous preparation

Preparation Note

This product is extracted using a method that causes shearing yielding a highly polymerized mixture of double and single stranded DNA . However, double stranded DNA is the predominant form.
This product is prepared from calf thymus tissue of unspecified gender.

Reconstitution

Solutions of DNA have been stored successfully for several months at 4 C, pH 7.5-8, in 10 mM Tris with 1 mM EDTA and without a bacteriostatic agent. At low concentrations (μg/ml) DNA tends to absorb onto the surfaces of plastic tubes. It is not recommended to store DNA in highly alkaline solutions since DNA tends to degrade at alkaline pH greater than 8.0.
This product can be dissolved at 2 mg/ml in water. To reduce further shearing of the DNA, no sonication or stirring should be used. Gentle inversion overnight at 0-4 °C is recommended to completely solubilize the DNA. The presence of 1 mM EDTA is recommended to prevent nucleases from degrading the DNA.

Storage Class

11 - Combustible Solids

wgk_germany

WGK 3

flash_point_f

Not applicable

flash_point_c

Not applicable

ppe

Eyeshields, Gloves, type N95 (US)


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Certificados de análisis (COA)

Lot/Batch Number

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Oskar Szczepaniak et al.
Biomolecules, 10(5) (2020-05-06)
Since ancient times, fruits and edible plants have played a special role in the human diet for enhancing health and maintaining youthfulness. The aim of our work was to determine the interactions between naringin, a natural ingredient of grapefruits, and
A M Parker et al.
Journal of dairy science, 99(12), 9875-9884 (2016-10-04)
Bacterial contamination of milk fed to calves compromises calf health. Several bacterial pathogens that infect cows, including Mycoplasma bovis and Salmonella enterica ssp. enterica serovar Dublin, are shed in milk, providing a possible route of transmission to calves. Milk acidification
Fariba Mollarasouli et al.
Journal of pharmaceutical analysis, 10(5), 473-481 (2020-11-03)
In this study, an electrochemical DNA biosensor was developed using a straightforward methodology to investigate the interaction of indinavir with calf thymus double-stranded deoxyribonucleic acid (ct-dsDNA) for the first time. The decrease in the oxidation signals of deoxyguanosine (dGuo) and
Hironobu Ikehata et al.
Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology, 17(4), 404-413 (2018-02-22)
The amount of photolesions produced in DNA after exposure to physiological doses of ultraviolet radiation (UVR) can be estimated with high sensitivity and at low cost through an immunological assay, ELISA, which, however, provides only a relative estimate that cannot
Alysia M Parker et al.
Veterinary microbiology, 196, 118-125 (2016-12-13)
Mycoplasma bovis is a major pathogen in cattle causing mastitis, arthritis and pneumonia. First isolated in Australian cattle in 1970, M. bovis has persisted causing serious disease in infected herds. To date, genetic analysis of Australian M. bovis isolates has

Protocolos

Spectrophotometric assay at 260 nm measures nuclease S1 activity, vital for nucleic acid research, with defined enzyme unit criteria.

Spectrophotometric assay at 260 nm measures nuclease S1 activity, vital for nucleic acid research, with defined enzyme unit criteria.

Spectrophotometric assay at 260 nm measures nuclease S1 activity, vital for nucleic acid research, with defined enzyme unit criteria.

Spectrophotometric assay at 260 nm measures nuclease S1 activity, vital for nucleic acid research, with defined enzyme unit criteria.

Questions

1–3 of 3 Questions  
  1. What is the purity of the chemical available?

    1 answer
    1. The purity of this material is determined by UV absorption at 260 nm. One milligram of DNA is equivalent to approximately 20 A260 units. This product is assigned a minimum A260 specification of 16. This information is lot specific and reported in the product Certificate of Analysis. Please see the link below to review a sample or lot specific certificate:
      https://www.sigmaaldrich.com/US/en/product/sigma/d1501#product-documentation

      Helpful?

  2. This product is tested in 15 mM NaCl with 1.5 mM Sodium citrate, pH 7.0 using a 1 cm light path. One mg of DNA is equivalent to 20 A260 units. Is the sodium citrate monobasic, dibasic or tribasic? thank you

    1 answer
    1. Sodium citrate tribasic dihydrate was used to test this product.

      Helpful?

  3. How would you recommend soluting ctDNA for DNA determination? In Tris-EDTA (93302) or 15 mM NaCl and 1.5 mM Sodium Citrate? If we prepare the solution of 50 mg ctDNA + 50 ml Tris-EDTA and dilute it 1/20, would OD260 of 1.0 correspond to 50 ug/l? Thank you

    1 answer
    1. This product is tested in 15 mM NaCl with 1.5 mM Sodium citrate, pH 7.0 using a 1 cm light path. One mg of DNA is equivalent to 20 A260 units. Using other buffers would not be recommended as the data could not be comparable to that reported in the product Certificate of Analysis. See the link below for a sample CofA:
      https://www.sigmaaldrich.com/certificates/sapfs/PROD/sap/certificate_pdfs/COFA/Q14/D1501-BULKSLBW1517.pdf

      Helpful?

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