Z719056
Methods in Yeast Genetics 2005 Edition
D. Amberg, D. Burke and J. Strathem, Cold Spring Harbor Laboratory Press, 2005, 230 pp., soft cover
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About This Item
ISBN-13:
978-087969728-0
UNSPSC Code:
55101509
publication info
D. Amberg, D. Burke and J. Strathem, Cold Spring Harbor Laboratory Press, 2005, 230 pp., soft cover
manufacturer/tradename
Cold Spring Harbor
General description
This is an updated edition which provides a set of teaching experiments, along with protocols and recipes for the standard techniques and reagents used in the study of yeast biology. Since the last edition of the manual was published (2000), revolutionary advances in genomics and proteomics technologies have had a significant impact on the field. This updated edition reflects these advances, and also includes new techniques involving vital staining, visualization of Green Fluorescent Protein, new drug resistance markers, high-copy suppression, Tandem Affinity Protein tag protein purification, gene disruption by double-fusion polymerase chain reaction, and many other recent developments.
Table of Contents
EXPERIMENTS
I. Looking at Yeast Cells
II. Isolation and Characterization of Auxotrophic, Temperature-sensitive, and Osmotic-sensitive Mutants
III. Meiotic Mapping
IV. Mitotic Recombination and Random Spore Analysis
V. Transformation of Yeast
VI. Synthetic Lethal Mutants
VII. Gene Replacement
VIII. Isolation of ras2 Suppressors
IX. Manipulating Cell Types
X. Isolating Mutants by Insertional Mutagenesis
XI. Isolation of Separation of Function Mutants by Two-hybrid Differential Interaction Screening
TECHNIQUES AND PROTOCOLS
1. High-efficiency Transformation of Yeast
2. Quick and Dirty Plasmid Transformation of Yeast Colonies
3. Yeast DNA Isolations
A. Yeast DNA Miniprep (40 ml)
B. Yeast DNA Miniprep (5 ml)
C. A Ten-minute DNA Preparation from Yeast
D. Yeast Genomic DNA: Glass-bead Preparation
4. Yeast Protein Extracts
5. TAP Purification
6. Yeast RNA Isolations
7. Hydroxylamine Mutagenesis of Plasmid DNA
8. Assay of ß-Galactosidase in Yeast
9. Plate Assay for Carboxypeptidase ?
10. Random Spore Analysis
11. Yeast Vital Stains
A. DAPI Stain of Nuclear and Mitochondrial DNA
B. Visualizing Mitochondria with DiOC6 or DilC5(3)
C. Visualizing Vacuoles and Endocytic Compartments with FM4-64
D. Calcofluor Staining of Chitin and Bud Scars
12. Yeast Immunofluorescence
13. Actin Staining in Fixed Cells
14. PCR-mediated Gene Disruption
A. One-step PCR Gene Disruption
B. Gene Disruption by Double-fusion PCR
15. Yeast Colony PCR
16. Measuring Yeast Cell Density by Spectrophotometry
17. Cell Synchrony
18. Chromatin Immunoprecipitation
19. Flow Cytometry of Yeast DNA
20. Logarithmic Growth
21. EMS Mutagenesis
22. Tetrad Dissection
23. Making a Tetrad Dissection Needle
24. Picking Zygotes
25. Determining Plating Efficiency
26. DNA Miniprep from E. coli
27. Preparing and Transforming Competent E. coli
28. Storing and Handling of the Systematic Deletion Collection
APPENDICES
I. Looking at Yeast Cells
II. Isolation and Characterization of Auxotrophic, Temperature-sensitive, and Osmotic-sensitive Mutants
III. Meiotic Mapping
IV. Mitotic Recombination and Random Spore Analysis
V. Transformation of Yeast
VI. Synthetic Lethal Mutants
VII. Gene Replacement
VIII. Isolation of ras2 Suppressors
IX. Manipulating Cell Types
X. Isolating Mutants by Insertional Mutagenesis
XI. Isolation of Separation of Function Mutants by Two-hybrid Differential Interaction Screening
TECHNIQUES AND PROTOCOLS
1. High-efficiency Transformation of Yeast
2. Quick and Dirty Plasmid Transformation of Yeast Colonies
3. Yeast DNA Isolations
A. Yeast DNA Miniprep (40 ml)
B. Yeast DNA Miniprep (5 ml)
C. A Ten-minute DNA Preparation from Yeast
D. Yeast Genomic DNA: Glass-bead Preparation
4. Yeast Protein Extracts
5. TAP Purification
6. Yeast RNA Isolations
7. Hydroxylamine Mutagenesis of Plasmid DNA
8. Assay of ß-Galactosidase in Yeast
9. Plate Assay for Carboxypeptidase ?
10. Random Spore Analysis
11. Yeast Vital Stains
A. DAPI Stain of Nuclear and Mitochondrial DNA
B. Visualizing Mitochondria with DiOC6 or DilC5(3)
C. Visualizing Vacuoles and Endocytic Compartments with FM4-64
D. Calcofluor Staining of Chitin and Bud Scars
12. Yeast Immunofluorescence
13. Actin Staining in Fixed Cells
14. PCR-mediated Gene Disruption
A. One-step PCR Gene Disruption
B. Gene Disruption by Double-fusion PCR
15. Yeast Colony PCR
16. Measuring Yeast Cell Density by Spectrophotometry
17. Cell Synchrony
18. Chromatin Immunoprecipitation
19. Flow Cytometry of Yeast DNA
20. Logarithmic Growth
21. EMS Mutagenesis
22. Tetrad Dissection
23. Making a Tetrad Dissection Needle
24. Picking Zygotes
25. Determining Plating Efficiency
26. DNA Miniprep from E. coli
27. Preparing and Transforming Competent E. coli
28. Storing and Handling of the Systematic Deletion Collection
APPENDICES
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