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  • Development of an efficient method for phosphorodiamidate bond formation by using inorganic salts.

Development of an efficient method for phosphorodiamidate bond formation by using inorganic salts.

Bioorganic & medicinal chemistry letters (2012-01-10)
Taro Harakawa, Hirosuke Tsunoda, Akihiro Ohkubo, Kohji Seio, Mitsuo Sekine
ABSTRACT

Phosphorodiamidate morpholino oligonucleotides (PMOs) have been extensively applied in antisense strategies for gene regulation because of their high stability in serum and low toxicity. However, chain elongation of PMOs requires long reaction time because few efficient methods have been developed for the formation of phosphorodiamidate bonds. In this Letter, we examined the effect of various additives to improve the reaction efficiency for formation of the phosphorodiamidate bond in the synthesis of PMOs. The addition of certain inorganic salts to the reaction media was found to be more effective. Particularly, lithium bromide was the most effective reagent and led to considerable acceleration (ca. 10-fold improvement).

MATERIALS
Product Number
Brand
Product Description

Sigma-Aldrich
Lithium bromide solution, 54 wt. % in H2O
Sigma-Aldrich
Lithium bromide, ReagentPlus®, ≥99%
Sigma-Aldrich
Lithium bromide, AnhydroBeads, −10 mesh, 99.999% trace metals basis
Sigma-Aldrich
Lithium bromide, AnhydroBeads, −10 mesh, ≥99.9% trace metals basis
Sigma-Aldrich
Lithium bromide, powder and chunks, ≥99.995% trace metals basis