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  • Real-Time Visualization of Cellulase Activity by Microorganisms on Surface.

Real-Time Visualization of Cellulase Activity by Microorganisms on Surface.

International journal of molecular sciences (2020-09-13)
Pallavi Kumari, Tali Sayas, Patricia Bucki, Sigal Brown-Miyara, Maya Kleiman
ABSTRACT

A variety of methods to detect cellulase secretion by microorganisms has been developed over the years, none of which enables the real-time visualization of cellulase activity on a surface. This visualization is critical to study the interaction between soil-borne cellulase-secreting microorganisms and the surface of plant roots and specifically, the effect of surface features on this interaction. Here, we modified the known carboxymethyl cellulase (CMC) hydrolysis visualization method to enable the real-time tracking of cellulase activity of microorganisms on a surface. A surface was formed using pure CMC with acridine orange dye incorporated in it. The dye disassociated from the film when hydrolysis occurred, forming a halo surrounding the point of hydrolysis. This enabled real-time visualization, since the common need for post hydrolysis dyeing was negated. Using root-knot nematode (RKN) as a model organism that penetrates plant roots, we showed that it was possible to follow microorganism cellulase secretion on the surface. Furthermore, the addition of natural additives was also shown to be an option and resulted in an increased RKN response. This method will be implemented in the future, investigating different microorganisms on a root surface microstructure replica, which can open a new avenue of research in the field of plant root-microorganism interactions.

MATERIALS
Product Number
Brand
Product Description

Sigma-Aldrich
Acridine Orange hemi(zinc chloride) salt, For nucleic acid staining in cells or gels
Sigma-Aldrich
3,5-Dinitrosalicylic acid, used in colorimetric determination of reducing sugars
Sigma-Aldrich
Acridine Orange hydrochloride solution, ≥95.0% (HPLC), 10 mg/mL in H2O
Sigma-Aldrich
Potassium sodium tartrate tetrahydrate, ReagentPlus®, ≥99%
Sigma-Aldrich
Poly(dimethylsiloxane), viscosity 1.0 cSt (25 °C)
Sigma-Aldrich
Cellulase from Trichoderma reesei ATCC 26921, lyophilized powder, ≥1 unit/mg solid
Sigma-Aldrich
Carboxymethylcellulose sodium salt, Medium viscosity