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Identification of STAU1 as a regulator of HBV replication by TurboID-based proximity labeling.

iScience (2022-06-07)
Xia-Fei Wei, Shu-Ying Fan, Yu-Wei Wang, Shan Li, Shao-Yuan Long, Chun-Yang Gan, Jie Li, Yu-Xue Sun, Lin Guo, Pei-Yun Wang, Xue Yang, Jin-Lan Wang, Jing Cui, Wen-Lu Zhang, Ai-Long Huang, Jie-Li Hu
ABSTRACT

The core promoter (CP) of hepatitis B virus (HBV) is critical for HBV replication by controlling the transcription of pregenomic RNA (pgRNA). Host factors regulating the activity of the CP can be identified by different methods. Biotin-based proximity labeling, a powerful method with the capability to capture weak or dynamic interactions, has not yet been used to map proteins interacting with the CP. Here, we established a strategy, based on the newly evolved promiscuous enzyme TurboID, for interrogating host factors regulating the activity of HBV CP. Using this strategy, we identified STAU1 as an important factor involved in the regulation of HBV CP. Mechanistically, STAU1 indirectly binds to CP mediated by TARDBP, and recruits the SAGA transcription coactivator complex to the CP to upregulate its activity. Moreover, STAU1 binds to HBx and enhances the level of HBx by stabilizing it in a ubiquitin-independent manner.

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Roche
DIG-High Prime DNA Labeling and Detection Starter Kit I, sufficient for 12 labeling reactions, sufficient for 24 blots, suitable for hybridization, suitable for Northern blotting, suitable for Southern blotting
Roche
DIG Northern Starter Kit, suitable for Northern blotting, sufficient for 10 labeling reactions
Millipore
Anticorpo monoclonale ANTI-FLAG® M2, 96-well, clear, polystyrene, flat bottom plate
Sigma-Aldrich
Anti-HNF4A antibody produced in rabbit, affinity isolated antibody