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  • Long non-coding RNA-dependent mechanism to regulate heme biosynthesis and erythrocyte development.

Long non-coding RNA-dependent mechanism to regulate heme biosynthesis and erythrocyte development.

Nature communications (2018-10-24)
Jinhua Liu, Yapu Li, Jingyuan Tong, Jie Gao, Qing Guo, Lingling Zhang, Bingrui Wang, Hui Zhao, Hongtao Wang, Erlie Jiang, Ryo Kurita, Yukio Nakamura, Osamu Tanabe, James Douglas Engel, Emery H Bresnick, Jiaxi Zhou, Lihong Shi
ABSTRACT

In addition to serving as a prosthetic group for enzymes and a hemoglobin structural component, heme is a crucial homeostatic regulator of erythroid cell development and function. While lncRNAs modulate diverse physiological and pathological cellular processes, their involvement in heme-dependent mechanisms is largely unexplored. In this study, we elucidated a lncRNA (UCA1)-mediated mechanism that regulates heme metabolism in human erythroid cells. We discovered that UCA1 expression is dynamically regulated during human erythroid maturation, with a maximal expression in proerythroblasts. UCA1 depletion predominantly impairs heme biosynthesis and arrests erythroid differentiation at the proerythroblast stage. Mechanistic analysis revealed that UCA1 physically interacts with the RNA-binding protein PTBP1, and UCA1 functions as an RNA scaffold to recruit PTBP1 to ALAS2 mRNA, which stabilizes ALAS2 mRNA. These results define a lncRNA-mediated posttranscriptional mechanism that provides a new dimension into how the fundamental heme biosynthetic process is regulated as a determinant of erythrocyte development.

MATERIALS
Product Number
Brand
Product Description

Sigma-Aldrich
Cytosine β-D-arabinofuranoside hydrochloride, crystalline
Sigma-Aldrich
myo-Inositol, ≥99%
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Iron(II) sulfate heptahydrate, BioReagent, suitable for cell culture, suitable for insect cell culture, ≥99%
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Interleukin-3 human, IL-3, recombinant, expressed in E. coli, lyophilized powder, suitable for cell culture
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Adipic acid dihydrazide–Agarose, saline suspension
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Sodium (meta)periodate, BioUltra, ≥99.5% (RT)
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Histopaque®-1077, sterile-filtered, density: 1.077 g/mL
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Folic acid, ≥97%
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1-Thioglycerol, liquid, BioReagent, suitable for cell culture, ≥97% (titration)
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Hydrocortisone 21-hemisuccinate sodium salt, powder, BioReagent, suitable for cell culture