Accéder au contenu
Merck

Hydrogen-deuterium exchange in imidazole as a tool for studying histidine phosphorylation.

Analytical and bioanalytical chemistry (2014-10-31)
Małgorzata Cebo, Martyna Kielmas, Justyna Adamczyk, Marek Cebrat, Zbigniew Szewczuk, Piotr Stefanowicz
RÉSUMÉ

Isotope exchange at the histidine C2 atom of imidazole in D2O solution is well known to occur at a significantly slower rate than the exchange of amide protons. Analysis of the kinetics of this isotope-exchange reaction is proposed herein as a method of detecting histidine phosphorylation. This modification of His-containing peptides is challenging to pinpoint because of its instability under acidic conditions as well as during CID-MS analysis. In this work, we investigated the effect of phosphorylation of the histidine side chain in peptides on deuterium-hydrogen exchange (DHX) in the imidazole. The results demonstrate that phosphorylation dramatically slows the rate of the DHX reaction. This phenomenon can be applied to detect phosphorylation of peptides at the histidine residue (e.g., in enzymatic digests). We also found that the influence of the peptide sequence on the exchange kinetics is relatively small. A CID fragmentation experiment revealed that there was no detectable hydrogen scrambling in peptides deuterated at C2 of the imidazole ring. Therefore, MS/MS can be used to directly identify the locations of deuterium ions incorporated into peptides containing multiple histidine moieties.

MATÉRIAUX
Référence du produit
Marque
Description du produit

Sigma-Aldrich
Acétonitrile, suitable for HPLC, gradient grade, ≥99.9%
Sigma-Aldrich
Méthanol, suitable for HPLC, ≥99.9%
Sigma-Aldrich
Eau, suitable for HPLC
Sigma-Aldrich
Oxyde de deutérium, 99.9 atom % D
Sigma-Aldrich
Dichlorométhane, suitable for HPLC, ≥99.8%, contains amylene as stabilizer
Sigma-Aldrich
Méthanol, ACS reagent, ≥99.8%
Sigma-Aldrich
Acétonitrile, HPLC Plus, ≥99.9%
Sigma-Aldrich
Dichlorométhane, contains 40-150 ppm amylene as stabilizer, ACS reagent, ≥99.5%
Sigma-Aldrich
Eau, Nuclease-Free Water, for Molecular Biology
Sigma-Aldrich
N,N-Diméthylformamide, ACS reagent, ≥99.8%
Sigma-Aldrich
N,N-Diméthylformamide, suitable for HPLC, ≥99.9%
Sigma-Aldrich
Acide formique, reagent grade, ≥95%
Sigma-Aldrich
Méthanol, HPLC Plus, ≥99.9%
Sigma-Aldrich
Dichlorométhane, HPLC Plus, for HPLC, GC, and residue analysis, ≥99.9%, contains 50-150 ppm amylene as stabilizer
Sigma-Aldrich
Eau, sterile-filtered, BioReagent, suitable for cell culture
Sigma-Aldrich
Acide formique, ACS reagent, ≥96%
Sigma-Aldrich
Acétonitrile, ACS reagent, ≥99.5%
Sigma-Aldrich
Ammoniac solution, 7 N in methanol
Sigma-Aldrich
Eau, Deionized
Sigma-Aldrich
Acétonitrile, suitable for HPLC, gradient grade, ≥99.9%
Sigma-Aldrich
Méthanol, suitable for HPLC, gradient grade, suitable as ACS-grade LC reagent, ≥99.9%
Sigma-Aldrich
N,N-Diisopropyléthylamine, 99.5%, biotech. grade
Sigma-Aldrich
N,N-Diméthylformamide, anhydrous, 99.8%
Sigma-Aldrich
Dichlorométhane, ACS reagent, ≥99.5%, contains 40-150 ppm amylene as stabilizer
Sigma-Aldrich
Oxyde de deutérium, 99.9 atom % D, contains 0.05 wt. % 3-(trimethylsilyl)propionic-2,2,3,3-d4 acid, sodium salt
Sigma-Aldrich
Acétonitrile, anhydrous, 99.8%
Sigma-Aldrich
Méthanol, Laboratory Reagent, ≥99.6%
Sigma-Aldrich
Dichlorométhane, anhydrous, ≥99.8%, contains 40-150 ppm amylene as stabilizer
Sigma-Aldrich
Eau, for embryo transfer, sterile-filtered, BioXtra, suitable for mouse embryo cell culture
Sigma-Aldrich
N,N-Diméthylformamide, ReagentPlus®, ≥99%