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D4889

Deoxyribonucleic acid sodium salt from Escherichia coli strain B

Genomic, unsheared

Synonym(s):

DNA

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About This Item

CAS Number:
UNSPSC Code:
41106310
eCl@ss:
32160414
EC Number:
297-226-7
NACRES:
NA.52
MDL number:
Biological source:
Escherichia coli
Form:
lyophilized powder
Solubility:
water: ~1 g/L
Storage temp.:
2-8°C
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biological source

Escherichia coli

Quality Segment

grade

Molecular Biology

form

lyophilized powder

mol wt

>45 kb

solubility

water: ~1 g/L

storage temp.

2-8°C

General description

Escherichia coli strain B is most widely studied DNA after k-12. The genomes of E coli strain B and k-12 show differences in the IS sequence elements. Strain B have B-islands and express O-specific side-chain LPS. The product is unsheared genomic DNA.

Application

The DNAs are particularly useful for genomic analysis, including PCR, library construction in bacteriophage λ, and in heterologous pre-hybridization and hybridization protocols.
Deoxyribonucleic acid sodium salt from Escherichia coli strain B has been used for:
  • PCR reactions of genomic DNA of Gardnerella vaginalis[1]
  • nick translation and radiolabeling of dNTP[2]
  • generating standard curve for 16S rDNA quantification[3]
  • transfecting neutrophils[4]
  • testing the extraction methods[5]

Biochem/physiol Actions

50% GC; Tm = 90.5 °C

Preparation Note

Purified by anion exchange chromatography, dialyzed against a solution of 1 mM sodium chloride, 1 mM EDTA and 1 mM Trizma HCl, pH 7.5 and lyophilized at a concentration of approx. 2 units per mL. Approx. 20 A260 units per mg DNA. % GC is the percentage of G/C base pairs. Tm is the temperature at the midpoint of the thermal denaturation profile.

Analysis Note

Analyzed by gel electrophoresis and visualization after ethidium bromide staining, with single predominant band of 45 kB or greater.

Other Notes

DNA in solution will reanneal on standing at room temperature so it is recommended to boil the solution for 10 minutes and then cool on ice for at least 5 minutes prior to use.
One unit will yield an A260 of 1.0 in 1.0 ml of 1 mM Tris-HCl, pH 7.5, with 1 mM NaCl and 1 mM EDTA (1 cm light path).

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This Item
D2001S3917D9768
biological source

Escherichia coli

biological source

-

biological source

-

biological source

-

grade

Molecular Biology

grade

-

grade

Molecular Biology

grade

Molecular Biology

Quality Level

200

Quality Level

200

Quality Level

200

Quality Level

200

form

lyophilized powder

form

fibers

form

liquid

form

lyophilized powder

storage temp.

2-8°C

storage temp.

2-8°C

storage temp.

−20°C

storage temp.

2-8°C

solubility

water: ~1 g/L

solubility

water: 0.98-1.02 mg/mL, faintly hazy to hazy, colorless to light yellow

solubility

-

solubility

-


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Storage Class

11 - Combustible Solids

wgk

WGK 3

flash_point_f

Not applicable

flash_point_c

Not applicable

ppe

Eyeshields, Gloves, type N95 (US)



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Questions

1–2 of 2 Questions  
  1. D4889 Sigma-Aldrich Deoxyribonucleic acid sodium salt from Escherichia coli strain B I have 1 Unit of this DNA. Just want to make sure if it =50ug. Also, Can i use TE buffer to dilute the DNA? thank you for your help.

    1 answer
    1. One unit of DNA equals 50 µg. Molecular biology grade TE buffer is suitable for diluting DNA.

      Helpful?

  2. what is the absolute amount of DNA in this product is it 50µg?

    1 answer
    1. This product is supplied in a unit size. 1 unit of any DNA = 50 µg.

      Helpful?

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