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  • QSPR modeling of octanol/water partition coefficient for vitamins by optimal descriptors calculated with SMILES.

QSPR modeling of octanol/water partition coefficient for vitamins by optimal descriptors calculated with SMILES.

European journal of medicinal chemistry (2007-07-17)
A A Toropov, A P Toropova, I Raska
ABSTRACT

Simplified molecular input line entry system (SMILES) has been utilized in constructing quantitative structure-property relationships (QSPR) for octanol/water partition coefficient of vitamins and organic compounds of different classes by optimal descriptors. Statistical characteristics of the best model (vitamins) are the following: n=17, R(2)=0.9841, s=0.634, F=931 (training set); n=7, R(2)=0.9928, s=0.773, F=690 (test set). Using this approach for modeling octanol/water partition coefficient for a set of organic compounds gives a model that is statistically characterized by n=69, R(2)=0.9872, s=0.156, F=5184 (training set) and n=70, R(2)=0.9841, s=0.179, F=4195 (test set).

MATERIALS
Product Number
Brand
Product Description

Sigma-Aldrich
Pentachloroethane, 95%
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Tetrachloroethylene, anhydrous, ≥99%
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4-Aminobenzoic acid, purified by sublimation, ≥99%
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Cyclohexane, anhydrous, 99.5%
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1,4-Dimethylnaphthalene, 95%
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2-Methylbutane, anhydrous, ≥99%
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Mesitylene, 98%
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Cycloheptane, 98%
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Chloroethane solution, 2.0 M in tert-butyl methyl ether, anhydrous
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Bromobenzene, ReagentPlus®, 99%
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Naphthalene, 99%
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Pyrene, 98%
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1,2,4,5-Tetramethylbenzene, 98%
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L-Ascorbic acid, ACS reagent, ≥99%
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1,2,4-Trichlorobenzene, anhydrous, ≥99%
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1,2-Dichlorobenzene, anhydrous, 99%
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2,3-Dimethylnaphthalene, 97%
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9-Methylanthracene, 98%
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1-Chloronaphthalene, technical grade
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2-Methylhexane, 99%
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1-Chloropentane, 99%
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Decane, anhydrous, ≥99%
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Chlorobenzene, anhydrous, 99.8%
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1,3-Dimethylnaphthalene, 96%
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Anthracene, reagent grade, 97%
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m-Xylene, anhydrous, ≥99%
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4-Chlorotoluene, 98%
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2-Chlorotoluene, 99%
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tert-Butylbenzene, 99%
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Fluorobenzene, 99%