Skip to Content
Merck
  • Combined experimental and in silico approaches for exploring antiperoxidative potential of structurally diverse classes of antioxidants on docetaxel-induced lipid peroxidation using 4-HNE as the model marker.

Combined experimental and in silico approaches for exploring antiperoxidative potential of structurally diverse classes of antioxidants on docetaxel-induced lipid peroxidation using 4-HNE as the model marker.

Bioorganic chemistry (2014-06-03)
Partha Pratim Roy, Sarbani Dey Ray, Supratim Ray
ABSTRACT

The objective of the present work was tantamount to explain the antiperoxidative potential and structural requirements of twenty-eight structurally diverse classes of antioxidants on docetaxel-induced lipid peroxidation. Both experimental and computational approaches were taken to the work. The experiments were performed in vitro and goat liver was used as a source of lipid. 4-hydroxy-2-nonenal was used as model marker for estimation of docetaxel-lipid interaction. The computational portion of the work was limited to QSAR analysis of those antioxidants for better understanding of the structural requirements of antioxidants on docetaxel-lipid interaction. The study was done with freely online available 2D descriptors available on PaDEL (open source). Stepwise regression analysis was used as chemometric tool. The experimental study showed the lipid peroxidation induction capacity of docetaxel. It was also noted that all twenty-eight antioxidants had the ability to suppress the lipid peroxidation. But among them butylated hydroxyl toluene showed the highest potential (-20.5%) and flavone showing lowest potential (-0.8%) to suppress the docetaxel-induced lipid peroxidation. The computational study indicates the importance of topology of the whole molecules, topological distances among atoms within a molecule and specific fragment pattern present in a molecule required for inhibition of lipid peroxidation.

MATERIALS
Product Number
Brand
Product Description

Sigma-Aldrich
Naringenin, natural (US), 98%
Sigma-Aldrich
L-Ascorbic acid, FCC, FG
Supelco
Guaiacol, Pharmaceutical Secondary Standard; Certified Reference Material
Supelco
Alpha Tocopherol, Pharmaceutical Secondary Standard; Certified Reference Material
Supelco
Butylated Hydroxytoluene, Pharmaceutical Secondary Standard; Certified Reference Material
Sigma-Aldrich
Quercetin, ≥95% (HPLC), solid
Sigma-Aldrich
L-Ascorbic acid, 99%
Sigma-Aldrich
Kaempferol, ≥97.0% (HPLC)
Sigma-Aldrich
Butylated hydroxytoluene, ≥99%, FCC, FG
Sigma-Aldrich
o-Cresol, ≥99%
Sigma-Aldrich
Guaiacol, natural, ≥99%, FG
Sigma-Aldrich
L-Ascorbic acid, BioXtra, ≥99.0%, crystalline
Sigma-Aldrich
L-Ascorbic acid, reagent grade, crystalline
Sigma-Aldrich
L-Ascorbic acid, reagent grade
Sigma-Aldrich
Trichloroacetic acid, suitable for electrophoresis, suitable for fixing solution (for IEF and PAGE gels), ≥99%
Sigma-Aldrich
(±)-α-Tocopherol, synthetic, ≥96% (HPLC)
Sigma-Aldrich
Kaempferol, ≥90% (HPLC), powder
Sigma-Aldrich
(±)-Naringenin, ≥95%
Sigma-Aldrich
Guaiacol, oxidation indicator
USP
Alpha Tocopherol, United States Pharmacopeia (USP) Reference Standard
Sigma-Aldrich
L-Ascorbic acid, powder, suitable for cell culture, γ-irradiated
Sigma-Aldrich
L-Ascorbic acid, puriss. p.a., ACS reagent, reag. ISO, Ph. Eur., 99.7-100.5% (oxidimetric)
Sigma-Aldrich
Trichloroacetic acid, ACS reagent, ≥99.0%
Sigma-Aldrich
L-Ascorbic acid, ACS reagent, ≥99%
Sigma-Aldrich
L-Ascorbic acid, puriss. p.a., ≥99.0% (RT)
Supelco
L-Ascorbic acid, certified reference material, TraceCERT®, Manufactured by: Sigma-Aldrich Production GmbH, Switzerland
Supelco
Quercetin, Pharmaceutical Secondary Standard; Certified Reference Material
Supelco
Ascorbic Acid, Pharmaceutical Secondary Standard; Certified Reference Material
Supelco
Curcumin, analytical standard
USP
Ascorbic acid, United States Pharmacopeia (USP) Reference Standard