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  • Interaction of myo-inositol hexakisphosphate with biogenic and synthetic polyamines.

Interaction of myo-inositol hexakisphosphate with biogenic and synthetic polyamines.

Organic & biomolecular chemistry (2015-06-13)
Julia Torres, Claudia Giorgi, Nicolás Veiga, Carlos Kremer, Antonio Bianchi
ABSTRACT

Within all the eukaryotic cells myo-inositol phosphates (InsPs) are an important group of biomolecules that are potentially related to signaling functions. The most abundant member of this family in nature is InsP6 (phytate, L(12-) in its fully deprotonated form). The complicated chemical behavior of this molecule demands a great effort to understand its function in the cell medium. In this work we follow our earlier studies on the interaction of InsP6 with metal cations by inclusion of polyamines (both biogenic and synthetic) as potential agents to produce stable adducts. The stability constants of InsP6-amine adducts and the relevant thermodynamic parameters ΔG°, ΔH°, and ΔS° were determined at 37.0 °C and 0.15 M ionic strength by means of potentiometric titrations and isothermal titration calorimetry (ITC). The biogenic amines studied were 1,4-diaminobutane (putrescine, put), 1,5-diaminopentane (cadaverine, cad), N-(3-aminopropyl)-1,4-diaminobutane (spermidine, spd), N,N'-bis(3-aminopropyl)-1,4-diaminobutane (spermine, spm), and 1-(4-aminobutyl)guanidine (agmatine, agm), while the synthetic models of longer polyamines were 1,19-dimethyl-1,4,7,10,13,16,19-heptaazanonadecane (Me2hexaen), 1,22-dimethyl-1,4,7,10,13,16,19,22-octaazadocosane (Me2heptaen), 1,25-dimethyl-1,4,7,10,13,16,19,22,25-nonaazapentacosane (Me2octaen) and N,N'-bis(3-aminopropyl)-1,3-propanediamine (3,3,3-tet). With the aid of molecular modeling, we also studied the structural aspects of molecular recognition in operation. The final result is a balance between many parameters including charge of the species, flexibility of the amines, H-bonds in the adduct, and desolvation processes.

MATERIALS
Product Number
Brand
Product Description

Sigma-Aldrich
Hydrogen chloride solution, 3 M in cyclopentyl methyl ether (CPME)
Sigma-Aldrich
Hydrochloric acid solution, ~6 M in H2O, for amino acid analysis
Sigma-Aldrich
Spermine tetrahydrochloride, BioUltra, for molecular biology, ≥99.5% (AT)
Sigma-Aldrich
1,4-Diaminobutane, 99%
Sigma-Aldrich
Spermine tetrahydrochloride, ≥99.0% (AT), powder or crystals
Supelco
Hydrochloric acid solution, volumetric, 0.1 M HCl (0.1N), endotoxin free
Sigma-Aldrich
Cadaverine dihydrochloride, ~98%
Sigma-Aldrich
Spermine tetrahydrochloride, powder or crystals
Sigma-Aldrich
Spermine tetrahydrochloride, BioReagent, for molecular biology
Sigma-Aldrich
Tetramethylammonium hydroxide solution, ACS reagent
Sigma-Aldrich
Hydrochloric acid solution, 1.0 N, BioReagent, suitable for cell culture
Sigma-Aldrich
Hydrochloric acid, 36.5-38.0%, BioReagent, for molecular biology
Sigma-Aldrich
Tetramethylammonium hydroxide solution, 25 wt. % in H2O
Sigma-Aldrich
Tetramethylammonium hydroxide solution, 10 wt. % in H2O
Sigma-Aldrich
Tetramethylammonium hydroxide solution, 25 wt. % in methanol
Sigma-Aldrich
Hydrochloric acid solution, 32 wt. % in H2O, FCC
SAFC
Spermidine trihydrochloride, ≥99.0% (AT)
Sigma-Aldrich
Hydrogen chloride, ReagentPlus®, ≥99%
Sigma-Aldrich
Spermidine trihydrochloride, ≥98% (TLC)
Sigma-Aldrich
Agmatine sulfate salt, ≥97%, powder
Sigma-Aldrich
Spermidine trihydrochloride, BioXtra, ≥99.5% (AT)