Skip to Content
Merck
  • Development of QSAR models for predicting hepatocarcinogenic toxicity of chemicals.

Development of QSAR models for predicting hepatocarcinogenic toxicity of chemicals.

European journal of medicinal chemistry (2009-03-11)
Ilaria Massarelli, Marcello Imbriani, Alessio Coi, Marilena Saraceno, Niccolò Carli, Anna Maria Bianucci
ABSTRACT

A dataset comprising 55 chemicals with hepatocarcinogenic potency indices was collected from the Carcinogenic Potency Database with the aim of developing QSAR models enabling prediction of the above unwanted property for New Chemical Entities. The dataset was rationally split into training and test sets by means of a sphere-exclusion type algorithm. Among the many algorithms explored to search regression models, only a Support Vector Machine (SVM) method led to a QSAR model, which was proved to pass rigorous validation criteria, in accordance with the OECD guidelines. The proposed model is capable to explain the hepatocarcinogenic toxicity and could be exploited for predicting this property for chemicals at the early stage of their development, so optimizing resources and reducing animal testing.

MATERIALS
Product Number
Brand
Product Description

Sigma-Aldrich
1,3-Butadiene solution, 20 wt. % in toluene
Supelco
Sulfisoxazole, VETRANAL®, analytical standard
Supelco
1,2,3-Trichloropropane, analytical standard
Sigma-Aldrich
2-Imidazolidinethione, 98%
Supelco
Dichloromethane, ≥99.9%
Sigma-Aldrich
1,5-Diaminonaphthalene, 97%
Sigma-Aldrich
3-Amino-2,5-dichlorobenzoic acid, 95%
Sigma-Aldrich
Tetrahydrofuran solution, contains 20 % (v/v) 1,2-Propanediol
Supelco
Dichloromethane solution, contains 10 % (v/v) methanol
Sigma-Aldrich
4,4′-Oxydianiline, 97%
Sigma-Aldrich
1,4-Dichlorobenzene, ≥99%
Sigma-Aldrich
Dichloromethane, suitable for HPLC, ≥99.9%, contains 40-150 ppm amylene as stabilizer
Supelco
4,4′-Diaminodiphenyl sulfide, analytical standard
Sigma-Aldrich
Hydrazobenzene
Supelco
2-Imidazolidinethione, PESTANAL®, analytical standard
Sigma-Aldrich
1,1,2-Trichloroethane, contains ≤3% 2-propanol as stabilizer, 97%
Sigma-Aldrich
Hexachloroethane, 99%
Supelco
Dichloromethane, analytical standard
Sigma-Aldrich
4,4′-Diaminodiphenyl sulfide, 98%
Sigma-Aldrich
Dichloromethane, anhydrous, ≥99.8%, contains 40-150 ppm amylene as stabilizer
Supelco
1,1,2-Trichloroethane, analytical standard
Supelco
Dichloromethane, Selectophore, ≥99.5%
Sigma-Aldrich
5,5-Diphenylhydantoin, ≥98%
Sigma-Aldrich
1,3-Butadiene solution, 15 wt. % in hexane
Supelco
Density Standard 1623 kg/m3, H&D Fitzgerald Ltd. Quality
Sigma-Aldrich
1,1,1,2-Tetrachloroethane, ReagentPlus®, 99%
Sigma-Aldrich
Dichloromethane, ACS reagent, ≥99.5%, contains 40-150 ppm amylene as stabilizer
Sigma-Aldrich
Dichloromethane, contains 40-150 ppm amylene as stabilizer, ACS reagent, ≥99.5%
Sigma-Aldrich
Dichloromethane, ACS reagent, ≥99.5%, contains 40-150 ppm amylene as stabilizer
Sigma-Aldrich
Dichloromethane, puriss., meets analytical specification of Ph. Eur., NF, ≥99% (GC)