Skip to Content
Merck
  • QSPR modeling of octanol/water partition coefficient for vitamins by optimal descriptors calculated with SMILES.

QSPR modeling of octanol/water partition coefficient for vitamins by optimal descriptors calculated with SMILES.

European journal of medicinal chemistry (2007-07-17)
A A Toropov, A P Toropova, I Raska
ABSTRACT

Simplified molecular input line entry system (SMILES) has been utilized in constructing quantitative structure-property relationships (QSPR) for octanol/water partition coefficient of vitamins and organic compounds of different classes by optimal descriptors. Statistical characteristics of the best model (vitamins) are the following: n=17, R(2)=0.9841, s=0.634, F=931 (training set); n=7, R(2)=0.9928, s=0.773, F=690 (test set). Using this approach for modeling octanol/water partition coefficient for a set of organic compounds gives a model that is statistically characterized by n=69, R(2)=0.9872, s=0.156, F=5184 (training set) and n=70, R(2)=0.9841, s=0.179, F=4195 (test set).

MATERIALS
Product Number
Brand
Product Description

Sigma-Aldrich
Ethylbenzene solution, NMR reference standard, 5% in chloroform-d (99.8 atom % D), TMS 1 %, NMR tube size 5 mm × 7 in.
Sigma-Aldrich
Anthracene, sublimed grade, ≥99%
Supelco
Benzo[k]fluoranthene, certified reference material, TraceCERT®, Manufactured by: Sigma-Aldrich Production GmbH, Switzerland
Supelco
Benzo[b]fluoranthene, certified reference material, TraceCERT®, Manufactured by: Sigma-Aldrich Production GmbH, Switzerland
Sigma-Aldrich
L-Ascorbic acid, FCC, FG
Sigma-Aldrich
Ethylbenzene solution, NMR reference standard, 0.1% in chloroform-d (99.8 atom % D), TMS 0.1 %
Sigma-Aldrich
Octane, electronic grade, ≥99.999% metals basis, ≥99% (CP)
Sigma-Aldrich
Benzo[b]fluoranthene, 98%
Supelco
Density Standard 692 kg/m3, H&D Fitzgerald Ltd. Quality
Sigma-Aldrich
Vitamin D2 solution, 100 μg/mL in ethanol, 98% (CP)
Sigma-Aldrich
Naphthalene, 99%
Sigma-Aldrich
2-Methylbutane, anhydrous, ≥99%
Sigma-Aldrich
Fluorene, 98%
Sigma-Aldrich
4-Aminobenzoic acid, ReagentPlus®, 99%
Sigma-Aldrich
Hexamethylbenzene, 99%
Sigma-Aldrich
p-Cymene, ≥97%, FG
Sigma-Aldrich
Decane, anhydrous, ≥99%
Sigma-Aldrich
Cyclohexane, anhydrous, 99.5%
Sigma-Aldrich
1,2-Dibromobenzene, 98%
Sigma-Aldrich
Naphthalene, suitable for scintillation, ≥99%
Sigma-Aldrich
Mesitylene, reagent grade, 97%
Sigma-Aldrich
1-Chloronaphthalene, technical grade
Sigma-Aldrich
Pyrene, 98%
Sigma-Aldrich
1-Chlorobutane, anhydrous, 99.5%
Sigma-Aldrich
1,2-Dibromoethane, 98%
Sigma-Aldrich
Undecane, ≥99%
Sigma-Aldrich
Heptane, biotech. grade, ≥99%
Sigma-Aldrich
Heptane, anhydrous, 99%
Sigma-Aldrich
Butylbenzene, ≥99%
Supelco
Benzo[b]fluoranthene, analytical standard