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  • Chimeric RNA Oligonucleotides with Triazole and Phosphate Linkages: Synthesis and RNA Interference.

Chimeric RNA Oligonucleotides with Triazole and Phosphate Linkages: Synthesis and RNA Interference.

Chemistry, an Asian journal (2015-08-08)
Tomoko Fujino, Kanako Kogashi, Koudai Okada, Martin Mattarella, Takeru Suzuki, Kenichi Yasumoto, Kazuhiro Sogawa, Hiroyuki Isobe
ABSTRACT

Chimeric RNA oligonucleotides with an artificial triazole linker were synthesized using solution-phase click chemistry and solid-phase automated synthesis. Scalable synthesis methods for jointing units for the chimeric structure have been developed, and after click-coupling of the jointing units with triazole linkers, a series of chimeric oligonucleotides was prepared by utilizing the well-established phosphoramidite method for the elongation. The series of chimeric 21-mer oligonucleotides that possessed the triazole linker at different strands and positions allowed for a screening study of the RNA interference to clarify the preference of the triazole modifications in small-interfering RNA molecules.

MATERIALS
Product Number
Brand
Product Description

Sigma-Aldrich
Isobutyryl chloride, 98%
Sigma-Aldrich
Benzyl bromide, reagent grade, 98%
Sigma-Aldrich
Pyridinium dichromate, 98%