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  • N6-methyladenosine modification regulates ferroptosis through autophagy signaling pathway in hepatic stellate cells.

N6-methyladenosine modification regulates ferroptosis through autophagy signaling pathway in hepatic stellate cells.

Redox biology (2021-10-05)
Min Shen, Yujia Li, Yingqian Wang, Jiangjuan Shao, Feng Zhang, Guoping Yin, Anping Chen, Zili Zhang, Shizhong Zheng
초록

Ferroptosis is a recently identified non-apoptotic form of cell death characterized by iron-dependent lipid peroxidation. However, the underlying exact mechanisms remain poorly understood. Here, we report that the total levels of N6-methyladenosine (m6A) modification are evidently increased upon exposure to ferroptosis-inducing compounds due to the upregulation of methylase METTL4 and the downregulation of demethylase FTO. Interestingly, RNA-seq shows that m6A modification appears to trigger autophagy activation by stabilizing BECN1 mRNA, which may be the potential mechanism for m6A modification-enhanced HSC ferroptosis. Importantly, YTHDF1 is identified as a key m6A reader protein for BECN1 mRNA stability, and knockdown of YTHDF1 could prevent BECN1 plasmid-induced HSC ferroptosis. Noteworthy, YTHDF1 promotes BECN1 mRNA stability and autophagy activation via recognizing the m6A binding site within BECN1 coding regions. In mice, erastin treatment alleviates liver fibrosis by inducing HSC ferroptosis. HSC-specific inhibition of m6A modification could impair erastin-induced HSC ferroptosis in murine liver fibrosis. Moreover, we retrospectively analyzed the effect of sorafenib on HSC ferroptosis and m6A modification in advanced fibrotic patients with hepatocellular carcinoma (HCC) receiving sorafenib monotherapy. Attractively, the m6A modification upregulation, autophagy activation, and ferroptosis induction occur in human HSCs. Overall, these findings reveal novel signaling pathways and molecular mechanisms of ferroptosis, and also identify m6A modification-dependent ferroptosis as a potential target for the treatment of liver fibrosis.

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Corning® Costar® TC-Treated Multiple Well Plates, size 6 wells, clear, polystyrene plate, flat bottom, case of 50 (individually wrapped), sterile, lid
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Glutathione Assay Kit, sufficient for 700 assays
Sigma-Aldrich
Retinol, BioXtra, ≥97.5% (HPLC), ~3100 U/mg
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Cycloheximide, from microbial, ≥94% (TLC)
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Sodium orthovanadate, ≥90% (titration)
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Paraformaldehyde, reagent grade, crystalline
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Protease Inhibitor Cocktail, for use with mammalian cell and tissue extracts, DMSO solution
Corning® tissue-culture treated culture dishes, D × H 150 mm × 25 mm
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Urea, powder, BioReagent, for molecular biology, suitable for cell culture
Millipore
Benzonase® Nuclease, ≥250 units/μL, ≥90% (SDS-PAGE), recombinant, expressed in E. coli, buffered aqueous glycerol solution
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Ethylenediaminetetraacetic acid, anhydrous, crystalline, BioReagent, suitable for cell culture
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Deoxyribonuclease I from bovine pancreas, Standardized vial containing 2,000 Kunitz units of DNase I (D4527), vial of ≥0.25 mg total protein
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Histodenz, nonionic density gradient medium
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Sodium fluoride, BioXtra, ≥99%
Roche
cOmplete, EDTA-free Protease Inhibitor Cocktail, Tablets provided in EASYpacks
Roche
Pronase, from Streptomyces griseus