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  • Identification of the determinants of 2-deoxyglucose sensitivity in cancer cells by shRNA library screening.

Identification of the determinants of 2-deoxyglucose sensitivity in cancer cells by shRNA library screening.

Biochemical and biophysical research communications (2015-09-26)
Hiroki Kobayashi, Haruna Nishimura, Ken Matsumoto, Minoru Yoshida
ABSTRACT

Combining glycolytic inhibition with other anti-cancer therapies is a potential approach to treating cancer. In this context, we attempted to identify genes that determine sensitivity to 2-deoxyglucose (2DG), a glycolytic inhibitor, in cancer cells using pooled shRNA libraries targeting ∼15,000 genes. The screen revealed that COPB1 and ARCN1, which are essential in retrograde transport, as determinants of sensitivity to 2DG: silencing of COPB1 or ARCN1 expression sensitized cells to 2DG toxicity. To address the mechanism of potentiation of 2DG toxicity by inhibition of COPI-mediated transport, we focused on the role of lipolysis as an alternate source of energy upon inhibition of glycolysis. In the process of lipolysis, COPI-mediated transport is required for localization to lipid droplets of adipose triglyceride lipase (ATGL), a key enzyme that produces fatty acids from triacylglycerol as a substrate for β-oxidation. The ATGL inhibitor atglistatin potentiated 2DG toxicity, consistent with a model in which a defect in COPI-mediated transport of ATGL to lipid droplets inhibits energy supply, thereby sensitizing cells to glycolytic inhibition. Collectively, our data demonstrated that a defect in COPI-mediated transport or pharmacological inhibition of ATGL potentiates 2DG toxicity in cancer cells, possibly due to a reduction in the energy supply.

MATERIALS
Product Number
Brand
Product Description

SAFC
HEPES
Sigma-Aldrich
MISSION® esiRNA, targeting human COPB1
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Tris(tert-butoxy)silanol, 99.999%
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Ethylene glycol-bis(2-aminoethylether)-N,N,N′,N′-tetraacetic acid, BioXtra, ≥97 .0%
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Actinomycin D, from Streptomyces sp., ≥95% (HPLC)
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Ethylene glycol-bis(2-aminoethylether)-N,N,N′,N′-tetraacetic acid, ≥97.0%
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HEPES, ≥99.5% (titration)
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HEPES, BioXtra, pH 5.0-6.5 (1 M in H2O), ≥99.5% (titration)
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HEPES, BioXtra, suitable for mouse embryo cell culture, ≥99.5% (titration)
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2-Deoxy-D-glucose, ≥98% (GC), BioXtra
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Actinomycin D, from Streptomyces sp., ~98% (HPLC)
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2-Deoxy-D-glucose, ≥99% (GC), crystalline
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2-Deoxy-D-glucose, ≥98% (GC), crystalline
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Actinomycin D, from Streptomyces sp., suitable for cell culture, ≥95%
SAFC
HEPES
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MISSION® esiRNA, targeting mouse Copb1
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Ethylene glycol-bis(2-aminoethylether)-N,N,N′,N′-tetraacetic acid, for molecular biology, ≥97.0%
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Ethylenediaminetetraacetic acid, anhydrous, crystalline, BioReagent, suitable for cell culture
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Ethylenediaminetetraacetic acid, purified grade, ≥98.5%, powder
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Ethylenediaminetetraacetic acid, ACS reagent, 99.4-100.6%, powder
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