Skip to Content
Merck

Xylella fastidiosa esterase rather than hydroxynitrile lyase.

Chembiochem : a European journal of chemical biology (2015-02-17)
Guzman Torrelo, Fayene Zeferino Ribeiro de Souza, Emanuel Carrilho, Ulf Hanefeld
ABSTRACT

In 2009, we reported that the product of the gene SCJ21.16 (XFa0032) from Xylella fastidiosa, a xylem-restricted plant pathogen that causes a range of diseases in several important crops, encodes a protein (XfHNL) with putative hydroxynitrile lyase activity. Sequence analysis and activity tests indicated that XfHNL exhibits an α/β-hydrolase fold and could be classified as a member of the family of FAD-independent HNLs. Here we provide a more detailed sequence analysis and new experimental data. Using pure heterologously expressed XfHNL we show that this enzyme cannot catalyse the cleavage/synthesis of mandelonitrile and that this protein is in fact a non-enantioselective esterase. Homology modelling and ligand docking simulations were used to study the active site and support these results. This finding could help elucidate the common ancestor of esterases and hydroxynitrile lyases with an α/β -hydrolase fold.

MATERIALS
Product Number
Brand
Product Description

Supelco
4-Nitrophenol, PESTANAL®, analytical standard
Supelco
1-Butanol, analytical standard
Sigma-Aldrich
4-Nitrophenol solution, 10 mM
Sigma-Aldrich
4-Nitrophenol, ReagentPlus®, ≥99%
Sigma-Aldrich
Benzaldehyde, ReagentPlus®, ≥99%
Sigma-Aldrich
Methyl phenylcarbinyl acetate, ≥98%, FCC, FG
Sigma-Aldrich
Benzaldehyde, purified by redistillation, ≥99.5%
Sigma-Aldrich
1-Phenylethanol, 98%
Supelco
Benzaldehyde, analytical standard
Sigma-Aldrich
Benzaldehyde, puriss. p.a., ≥99.0% (GC)
Sigma-Aldrich
Heptane, biotech. grade, ≥99%
Sigma-Aldrich
Heptane, anhydrous, 99%
Sigma-Aldrich
Benzaldehyde, ≥98%, FG, FCC
Sigma-Aldrich
1-Butanol, for molecular biology, ≥99%
Sigma-Aldrich
1-Butanol, anhydrous, 99.8%
Supelco
tert-Butyl methyl ether, analytical standard
Supelco
Heptane, analytical standard
Sigma-Aldrich
Benzaldehyde, natural, FCC, FG
Sigma-Aldrich
α-Methylbenzyl alcohol, ≥99%, FCC, FG
Sigma-Aldrich
4-Nitrophenol, spectrophotometric grade
Supelco
Acetaminophen Related Compound F, Pharmaceutical Secondary Standard; Certified Reference Material
Sigma-Aldrich
Isopropyl alcohol, ≥99.7%, FCC, FG
Sigma-Aldrich
Heptane, suitable for HPLC, ≥99%
Supelco
Heptane, Pharmaceutical Secondary Standard; Certified Reference Material
Supelco
Benzaldehyde, Pharmaceutical Secondary Standard; Certified Reference Material
Sigma-Aldrich
1-Butanol, BioRenewable, ACS reagent, ≥99.4%
Sigma-Aldrich
tert-Butyl methyl ether, puriss. p.a., ≥99.5% (GC)
Sigma-Aldrich
tert-Butyl methyl ether, reagent grade, 98%
Sigma-Aldrich
Heptane, ReagentPlus®, 99%
Supelco
tert-Butyl Methyl Ether, Pharmaceutical Secondary Standard; Certified Reference Material