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  • Simple paired heavy- and light-chain antibody repertoire sequencing using endoplasmic reticulum microsomes.

Simple paired heavy- and light-chain antibody repertoire sequencing using endoplasmic reticulum microsomes.

Genome medicine (2018-04-29)
Praneeth Reddy Devulapally, Jörg Bürger, Thorsten Mielke, Zoltán Konthur, Hans Lehrach, Marie-Laure Yaspo, Jörn Glökler, Hans-Jörg Warnatz
ABSTRACT

Existing methods for paired antibody heavy- and light-chain repertoire sequencing rely on specialized equipment and are limited by their commercial availability and high costs. Here, we report a novel simple and cost-effective emulsion-based single-cell paired antibody repertoire sequencing method that employs only basic laboratory equipment. We performed a proof-of-concept using mixed mouse hybridoma cells and we also showed that our method can be used for discovery of novel antigen-specific monoclonal antibodies by sequencing human CD19+ B cell IgM and IgG repertoires isolated from peripheral whole blood before and seven days after Td (Tetanus toxoid/Diphtheria toxoid) booster immunization. We anticipate broad applicability of our method for providing insights into adaptive immune responses associated with various diseases, vaccinations, and cancer immunotherapies.

MATERIALS
Product Number
Brand
Product Description

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Magnesium acetate solution, BioUltra, for molecular biology, ~1 M in H2O
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Anti-Mouse IgG (Fc specific)–Peroxidase antibody produced in goat, affinity isolated antibody
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Span® 80, nonionic surfactant
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Mineral oil, for molecular biology, BioReagent, light oil
Sigma-Aldrich
TWEEN® 80, BioXtra, viscous liquid
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Triton X-100, laboratory grade