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Click Chemistry in Drug Discovery

Perhaps no reaction in the click family has received more attention than the Cu(I)-catalyzed Huisgen 1,3-dipolar cycloaddition of terminal alkynes with organoazides to yield 1,4-disubstituted 1,2,3-triazoles (Scheme 1).1 True to a “good” click reaction, the reaction is reliable and high yielding, easy to perform, invariant to the presence of air or moisture, and tolerant of a wide range of functional groups. In many instances, water is the ideal reaction solvent, providing the best yields and highest rates. Typically, the cycloadducts are solids, eliminating the need for chromatographic purification. The 1,2,3-triazole ring is resistant to hydrolysis, oxidation, reduction, or other modes of cleavage. All of these properties make the Cu(I)-catalyzed azide-alkyne cyclization an important weapon in library development during the drug discovery process.2-4

A chemical reaction diagram illustrating the synthesis of a compound. On the left, two reactants are shown: a linear molecule with a variable group R' and an azide group (N3) attached to another variable group R. The reaction conditions are specified in the center, including the use of copper sulfate pentahydrate (CuSO4·5H2O) at a concentration of 0.25-2 mol % and sodium ascorbate at 5-10 mol %. The reaction occurs in a solvent mixture of t-butanol and water at room temperature (rt). On the right, the product is depicted, featuring a six-membered ring with two nitrogen atoms and variable groups R and R'.

Scheme 1.Copper-catalyzed azide-alkyne cycloaddition reaction (CuAAC)

The use of a Cu(II) salt in the presence of an ascorbate reducing agent to form catalytically-active Cu(I) has been the method of choice for the preparative synthesis of 1,2,3-triazoles, but can be problematic in bioconjugation applications. A Cu(I) salt such as [Cu(CH3CN)4]PF6 may be used directly in the presence of the stabilizing ligand tris[(1-benzyl-1H-1,2,3-triazol-4-yl)methyl]amine, TBTA (Figure 1).8 TBTA has been shown to effectively enhance the copper-catalyzed cycloaddition without damaging biological scaffolds.5-7

A chemical reaction scheme depicting the synthesis of a compound. On the left, two reactants are illustrated: a linear alkyne represented by "R'" and another molecule with an azide group (N3) attached to a variable group "R." The center of the image details the reaction conditions, specifying the use of copper sulfate pentahydrate (CuSO4·5H2O) at a concentration of 0.25-2 mol % and sodium ascorbate at 5-10 mol %. The reaction is conducted in a solvent mixture of t-butanol and water (t-BuOH-H2O) at room temperature (rt). On the right, the resulting product is shown, which features a six-membered ring containing two nitrogen atoms and the variable groups "R" and "R'."

Figure 1.Tris[(1-benzyl-1H-1,2,3-triazol-4-yl)methyl]amine, TBTA

Whereas the Cu(I)-catalyzed reaction provides access to 1,4- disubstituted triazoles, a transition metal variant allows for access to the complementary 1,5-isomer. Treatment of a terminal or internal alkyne with an azide in the presence of catalytic Cp*RuCl(PPh3)2 cleanly provides the cycloadduct in superb yield with complete control of regiospecificity (Scheme 2).4

A chemical reaction diagram illustrating the synthesis of a compound. On the left, a phenyl azide (with the azide group N3 attached to a phenyl ring) is shown alongside a linear alkyne with a phenyl group (Ph) at both ends. The reaction conditions are detailed in the center, indicating the use of a catalyst, cyclopentadienyl ruthenium chloride (Cp*RuCl(PPh3)2), in the solvent toluene (C6H6) under reflux for 2 hours. On the right, the resulting product is depicted, featuring a six-membered ring with three nitrogen atoms and two phenyl groups attached.

Scheme 2.Ruthenium-catalyzed one step azide-alkyne cycloaddition (RuAAC)

Of course, many organoazides are not commercially available. Carreira and co-workers recently reported the Co(II)-catalyzed hydroazidation of unactivated olefins with p-toluenesulfonyl azide (TsN3) to yield alkyl azides (Scheme 3).10-11 The catalyst is easily prepared in situ from Co(BF4)2·6H2O and a Schiff base ligand. Mono-, di-, and trisubstituted olefins are tolerated in the hydroazidation reaction, and complete Markovnikov selectivity is observed. Additionally, the reaction can be coupled to the Sharpless triazole cycloaddition to give the 1,4-triazole in a one-pot process.

A chemical reaction scheme illustrating the synthesis of a compound. On the left, two reactants are shown: a linear alkene with variable groups "R" and "R'" and a tosyl azide (TsN3). The reaction conditions are detailed in the center, specifying the use of cobalt(II) tetrafluoroborate hexahydrate (Co(BF4)2·6H2O) at a concentration of 6 mol %, tert-butyl hydroperoxide (t-BuOOH) at 30 mol %, and silane in a range of 1.6 to 4.0 equivalents, all in ethanol (EtOH) at 23°C for 2 to 24 hours. On the right, the resulting product is depicted, featuring a nitrogen-containing compound with variable groups "R" and "R'" and an azide group (N3).

Scheme 3.Cobalt-catalyzed hydroazidation of alkenes.

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View the full list of reagents, catalysts, and ligands for click chemistry applications.

References

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Rostovtsev V. 2002. Angew. Chem. Int. Ed. 412596.
2.
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Kolb H. 2001. Angew. Chem. Int. Ed. 402004.
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Chan TR, Hilgraf R, Sharpless KB, Fokin VV. 2004. Polytriazoles as Copper(I)-Stabilizing Ligands in Catalysis. Org. Lett. 6(17):2853-2855. https://doi.org/10.1021/ol0493094
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Zhang L, Chen X, Xue P, Sun HHY, Williams ID, Sharpless KB, Fokin VV, Jia G. 2005. Ruthenium-Catalyzed Cycloaddition of Alkynes and Organic Azides. J. Am. Chem. Soc. 127(46):15998-15999. https://doi.org/10.1021/ja054114s
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Waser J, Gaspar B, Nambu H, Carreira EM. 2006. Hydrazines and Azides via the Metal-Catalyzed Hydrohydrazination and Hydroazidation of Olefins. J. Am. Chem. Soc. 128(35):11693-11712. https://doi.org/10.1021/ja062355+
11.
Waser J, Nambu H, Carreira EM. 2005. Cobalt-Catalyzed Hydroazidation of Olefins: Convenient Access to Alkyl Azides. J. Am. Chem. Soc. 127(23):8294-8295. https://doi.org/10.1021/ja052164r
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Regitz M. 1973. Organic Syntheses. Coll. Vol. 5.(1):
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