Skip to Content
Merck
  • QSPR modeling of octanol/water partition coefficient for vitamins by optimal descriptors calculated with SMILES.

QSPR modeling of octanol/water partition coefficient for vitamins by optimal descriptors calculated with SMILES.

European journal of medicinal chemistry (2007-07-17)
A A Toropov, A P Toropova, I Raska
ABSTRACT

Simplified molecular input line entry system (SMILES) has been utilized in constructing quantitative structure-property relationships (QSPR) for octanol/water partition coefficient of vitamins and organic compounds of different classes by optimal descriptors. Statistical characteristics of the best model (vitamins) are the following: n=17, R(2)=0.9841, s=0.634, F=931 (training set); n=7, R(2)=0.9928, s=0.773, F=690 (test set). Using this approach for modeling octanol/water partition coefficient for a set of organic compounds gives a model that is statistically characterized by n=69, R(2)=0.9872, s=0.156, F=5184 (training set) and n=70, R(2)=0.9841, s=0.179, F=4195 (test set).

MATERIALS
Product Number
Brand
Product Description

Sigma-Aldrich
Phenanthrene, sublimed grade, ≥99.5%
Supelco
Density Standard 1623 kg/m3, H&D Fitzgerald Ltd. Quality
Sigma-Aldrich
Vitamin D3 solution, 100 μg/mL in ethanol, 97% (CP)
Supelco
Phenanthrene, analytical standard, for environmental analysis
Supelco
Menadione (K3), analytical standard
Supelco
Trichlorofluoromethane, analytical standard
Supelco
Fluoranthene, analytical standard
Sigma-Aldrich
2-Methylnaphthalene (β), 95%
Sigma-Aldrich
2,2,4-Trimethylpentane, anhydrous, 99.8%
Sigma-Aldrich
p-Xylene, anhydrous, ≥99%
Sigma-Aldrich
1-Pentene, 98%
Sigma-Aldrich
1,2-Dichlorobenzene solution, NMR reference standard, 5% in acetone-d6 (99.9 atom % D), NMR tube size 5 mm × 8 in.
Sigma-Aldrich
Diethyl sulfide, 98%
Sigma-Aldrich
3-Chlorotoluene, 98%
Supelco
Melting point standard 79-81°C, analytical standard
Supelco
Cumene, analytical standard
Supelco
2-Methylnaphthalene, analytical standard
Supelco
1,2-Dichloroethane, analytical standard
Supelco
2-Methylpentane, analytical standard
Supelco
Toluene, analytical standard
Supelco
Hexane, analytical standard
Supelco
Ethylbenzene, analytical standard
Supelco
Cyclopentane, analytical standard
Sigma-Aldrich
Ergocalciferol, ≥98.0% (sum of enantiomers, HPLC)
Supelco
Benzene, analytical standard
Supelco
1,2,3,5-Tetrachlorobenzene, PESTANAL®, analytical standard
Sigma-Aldrich
Trichlorofluoromethane, ≥99.5%
Sigma-Aldrich
1,2,3,4-Tetrachlorobenzene, 98%
Sigma-Aldrich
Cyclohexene, inhibitor-free, ReagentPlus®, 99%
Sigma-Aldrich
1,2,4,5-Tetrachlorobenzene, 98%