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  • Optimization of Tetrahydroindazoles as Inhibitors of Human Dihydroorotate Dehydrogenase and Evaluation of Their Activity and In Vitro Metabolic Stability.

Optimization of Tetrahydroindazoles as Inhibitors of Human Dihydroorotate Dehydrogenase and Evaluation of Their Activity and In Vitro Metabolic Stability.

Journal of medicinal chemistry (2020-03-28)
Gergana Popova, Marcus J G W Ladds, Lars Johansson, Aljona Saleh, Johanna Larsson, Lars Sandberg, Sara Häggblad Sahlberg, Weixing Qian, Hjalmar Gullberg, Neeraj Garg, Anna-Lena Gustavsson, Martin Haraldsson, David Lane, Ulrika Yngve, Sonia Lain
ABSTRACT

Human dihydroorotate dehydrogenase (DHODH), an enzyme in the de novo pyrimidine synthesis pathway, is a target for the treatment of rheumatoid arthritis and multiple sclerosis and is re-emerging as an attractive target for cancer therapy. Here we describe the optimization of recently identified tetrahydroindazoles (HZ) as DHODH inhibitors. Several of the HZ analogues synthesized in this study are highly potent inhibitors of DHODH in an enzymatic assay, while also inhibiting cancer cell growth and viability and activating p53-dependent transcription factor activity in a reporter cell assay. Furthermore, we demonstrate the specificity of the compounds toward the de novo pyrimidine synthesis pathway through supplementation with an excess of uridine. We also show that induction of the DNA damage marker γ-H2AX after DHODH inhibition is preventable by cotreatment with the pan-caspase inhibitor Z-VAD-FMK. Additional solubility and in vitro metabolic stability profiling revealed compound 51 as a favorable candidate for preclinical efficacy studies.

MATERIALS
Product Number
Brand
Product Description

Sigma-Aldrich
Bovine Serum Albumin, heat shock fraction, pH 7, ≥98%
Sigma-Aldrich
Pyrimidine, ≥98.0%
Sigma-Aldrich
DL-Dithiothreitol, ≥99.0% (RT)
Sigma-Aldrich
Glipizide, solid
Sigma-Aldrich
Potassium chloride, powder, BioReagent, suitable for cell culture, suitable for insect cell culture, ≥99.0%
Sigma-Aldrich
TWEEN® 20, for molecular biology, viscous liquid
Sigma-Aldrich
2-Mercaptoethanol, ≥99.0%
Sigma-Aldrich
Trizma® hydrochloride, BioPerformance Certified, suitable for cell culture, ≥99.0% (titration)
Sigma-Aldrich
Uridine, powder, BioReagent, suitable for cell culture
Sigma-Aldrich
Uridine 5′-monophosphate, ≥98%
Sigma-Aldrich
Trizma® base, Primary Standard and Buffer, ≥99.9% (titration), crystalline
Sigma-Aldrich
Diethylstilbestrol, ≥99% (HPLC)
Sigma-Aldrich
Trichloroacetic acid, ≥99.0% (titration)
Sigma-Aldrich
2,3-Dimethoxy-5-methyl-p-benzoquinone, apoptosis inducer
Sigma-Aldrich
Nutlin-3a, ≥98% (HPLC)
Sigma-Aldrich
Acetic acid, puriss. p.a., ACS reagent, reag. ISO, reag. Ph. Eur., ≥99.8%
Sigma-Aldrich
Lithium dodecyl sulfate, BioReagent, for molecular biology, suitable for electrophoresis
Sigma-Aldrich
Hydroxyurea, 98%, powder
Sigma-Aldrich
Sodium phosphate dibasic, BioXtra, ≥99.0%
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Glycerol, for molecular biology, ≥99.0%
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Magnesium chloride, anhydrous, ≥98%
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Etoposide, synthetic, 95.0-105.0%, powder
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2,6-Dichloroindophenol sodium salt hydrate, suitable for vitamin C determination, BioReagent
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Caffeine, powder, ReagentPlus®
Sigma-Aldrich
Triton X-100, laboratory grade
Sigma-Aldrich
Sulforhodamine B sodium salt, Technical grade
Sigma-Aldrich
Sodium phosphate monobasic, BioPerformance Certified, suitable for cell culture, suitable for insect cell culture, suitable for plant cell culture, ≥99.0% (titration)