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  • A Post-Transcriptional Feedback Mechanism for Noise Suppression and Fate Stabilization.

A Post-Transcriptional Feedback Mechanism for Noise Suppression and Fate Stabilization.

Cell (2018-05-15)
Maike M K Hansen, Winnie Y Wen, Elena Ingerman, Brandon S Razooky, Cassandra E Thompson, Roy D Dar, Charles W Chin, Michael L Simpson, Leor S Weinberger
ABSTRACT

Diverse biological systems utilize fluctuations ("noise") in gene expression to drive lineage-commitment decisions. However, once a commitment is made, noise becomes detrimental to reliable function, and the mechanisms enabling post-commitment noise suppression are unclear. Here, we find that architectural constraints on noise suppression are overcome to stabilize fate commitment. Using single-molecule and time-lapse imaging, we find that-after a noise-driven event-human immunodeficiency virus (HIV) strongly attenuates expression noise through a non-transcriptional negative-feedback circuit. Feedback is established through a serial cascade of post-transcriptional splicing, whereby proteins generated from spliced mRNAs auto-deplete their own precursor unspliced mRNAs. Strikingly, this auto-depletion circuitry minimizes noise to stabilize HIV's commitment decision, and a noise-suppression molecule promotes stabilization. This feedback mechanism for noise suppression suggests a functional role for delayed splicing in other systems and may represent a generalizable architecture of diverse homeostatic signaling circuits.

MATERIALS
Product Number
Brand
Product Description

Sigma-Aldrich
Dextran sulfate sodium salt, Mr ~40,000
Sigma-Aldrich
Leptomycin B solution from Streptomyces sp., ≥95% (HPLC), Supplied in methanol: water (7:3)
Sigma-Aldrich
Catalase from bovine liver, aqueous solution, ≥30,000 units/mg protein